RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 FAM111BQ6SJ93 734 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 FAM92BQ6ZTR7 304 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 RNF44Q7L0R7 432 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 GGHQ92820 318 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 YIPF6Q96EC8 236 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 TRNT1Q96Q11 434 aaKnown RBP18.89■□□□□ 0.61
USP39-204ENST00000409766 PHF7Q9BWX1 381 aaPredicted RBP18.89■□□□□ 0.61
USP39-204ENST00000409766 PINK1Q9BXM7 581 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 QRSL1Q9H0R6 528 aaKnown RBP18.89■□□□□ 0.61
USP39-204ENST00000409766 AMBNQ9NP70 447 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 GIN1Q9NXP7 522 aa18.89■□□□□ 0.61
USP39-204ENST00000409766 TMEM265A0A087WTH1 108 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 NME6O75414 186 aaPredicted RBP18.88■□□□□ 0.61
USP39-204ENST00000409766 GABARAPO95166 117 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 OSMP13725 252 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 NR4A1P22736 598 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 CDC42P60953 191 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 BNIP3Q12983 259 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 C6orf132Q5T0Z8 1188 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 PGBD2Q6P3X8 592 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 USP53Q70EK8 1073 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 TBC1D15Q8TC07 691 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 COL26A1Q96A83 441 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 OCEL1Q9H607 264 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 LYRM4Q9HD34 91 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 DUSP12Q9UNI6 340 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 KNL1Q8NG31 2342 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 SCN2AQ99250 2005 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 CHURC1-FNTBB4DL54 471 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 M0R129 80 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 FOXD2O60548 495 aaPredicted RBP18.88■□□□□ 0.61
USP39-204ENST00000409766 ZBTB11O95625 1053 aaPredicted RBP18.88■□□□□ 0.61
USP39-204ENST00000409766 BCL10O95999 233 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 EIF2S1P05198 315 aaKnown RBP18.88■□□□□ 0.61
USP39-204ENST00000409766 CTSEP14091 401 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 C21orf33P30042 268 aaPredicted RBP18.88■□□□□ 0.61
USP39-204ENST00000409766 NUDT1P36639 197 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 OLR1P78380 273 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 CHRNEQ04844 493 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 ILKQ13418 452 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 C1orf61Q13536 156 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 SPCS2Q15005 226 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 UBE2UQ5VVX9 321 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 PRSS41Q7RTY9 318 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 OR4N5Q8IXE1 308 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 ZNF687Q8N1G0 1237 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 MYDGFQ969H8 173 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 ZG16BQ96DA0 208 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 SLC35A4Q96G79 324 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 BCL7BQ9BQE9 202 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 MAN2C1Q9NTJ4 1040 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 CALML5Q9NZT1 146 aa18.88■□□□□ 0.61
USP39-204ENST00000409766 CDK1P06493 297 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 PSMB9P28065 219 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 CNR2P34972 360 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 ST13P50502 369 aaKnown RBP18.87■□□□□ 0.61
USP39-204ENST00000409766 NUDT6P53370 316 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 EMP3P54852 163 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 PPP1CAP62136 330 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 HPCAP84074 193 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 MANEAQ5SRI9 462 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 HEPHL1Q6MZM0 1159 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 MFSD12Q6NUT3 480 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 PODNL1Q6PEZ8 512 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 ZNF761Q86XN6 746 aaPredicted RBP18.87■□□□□ 0.61
USP39-204ENST00000409766 OR2L13Q8N349 312 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 RLN3Q8WXF3 142 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 KLHDC7BQ96G42 594 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 MS4A4EQ96PG1 132 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 GAS2L1Q99501 681 aaPredicted RBP18.87■□□□□ 0.61
USP39-204ENST00000409766 FNDC11Q9BVV2 318 aa18.87■□□□□ 0.61
USP39-204ENST00000409766 DNAAF2Q9NVR5 837 aaKnown RBP18.87■□□□□ 0.61
USP39-204ENST00000409766 OR5K3A6NET4 321 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 ZNF860A6NHJ4 632 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 SLITRK5O94991 958 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 LCKP06239 509 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 POU1F1P28069 291 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 SOX18P35713 384 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 ENTPD1P49961 510 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 UGT2B15P54855 530 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 HHEXQ03014 270 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 TDGQ13569 410 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 ZNF311Q5JNZ3 666 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 ATAD3BQ5T9A4 648 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 ZNF438Q7Z4V0 828 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 WDR53Q7Z5U6 358 aaPredicted RBP18.86■□□□□ 0.61
USP39-204ENST00000409766 PARGQ86W56 976 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 TMEFF1Q8IYR6 380 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 FAM160A2Q8N612 972 aaPredicted RBP18.86■□□□□ 0.61
USP39-204ENST00000409766 SLC16A11Q8NCK7 471 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 PRRC1Q96M27 445 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 GPR83Q9NYM4 423 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 SELENONQ9NZV5 590 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 DUXAA6NLW8 204 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 SYT5O00445 386 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 MPZL2O60487 215 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 ZIC2O95409 532 aaPredicted RBP18.86■□□□□ 0.61
USP39-204ENST00000409766 CPMP14384 443 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 BLKP51451 505 aa18.86■□□□□ 0.61
USP39-204ENST00000409766 COL9A2Q14055 689 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms