RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 PIP4P1Q86T03 277 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 ZNF555Q8NEP9 628 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 GPR32P1Q8NGA4 272 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 ADAMTS18Q8TE60 1221 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 PROX1Q92786 737 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 RMND5BQ96G75 393 aaPredicted RBP13.2□□□□□ -0.3
LIMS2-206ENST00000409754 COL21A1Q96P44 957 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 YIPF4Q9BSR8 244 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 SPATA5L1Q9BVQ7 753 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 BTBD2Q9BX70 525 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 MRPS26Q9BYN8 205 aaKnown RBP13.2□□□□□ -0.3
LIMS2-206ENST00000409754 AMBRA1Q9C0C7 1298 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 FAM118AQ9NWS6 357 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 LIPT1Q9Y234 373 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 SH3GLB1Q9Y371 365 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 LYVE1Q9Y5Y7 322 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 CACNA1AO00555 2505 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 A0A087WV62 115 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 HYKKA2RU49 373 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 BLACEA4D250 179 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 DUXAA6NLW8 204 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 TNFRSF11BO00300 401 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 FOXS1O43638 330 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 DUX1O43812 170 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 CBFA2T3O75081 653 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 LDB3O75112 727 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 BMP10O95393 424 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 NSA2O95478 260 aaKnown RBP13.19□□□□□ -0.3
LIMS2-206ENST00000409754 CLIC3O95833 236 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 AGR2O95994 175 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 FESP07332 822 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 CHRM4P08173 479 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 RHCEP18577 417 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 DAPP51397 102 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 EMP3P54852 163 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 PUM1Q14671 1186 aaKnown RBP eCLIP13.19□□□□□ -0.3
LIMS2-206ENST00000409754 MFSD12Q6NUT3 480 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 CDC73Q6P1J9 531 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 FAHD1Q6P587 224 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 FAM111BQ6SJ93 734 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 CYP4Z1Q86W10 505 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 PLXDC1Q8IUK5 500 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 OR4C15Q8NGM1 316 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 ZNF675Q8TD23 568 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 ANKRD9Q96BM1 317 aaPredicted RBP13.19□□□□□ -0.3
LIMS2-206ENST00000409754 ZNF354BQ96LW1 612 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 PIP5K1AQ99755 562 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 ENAMQ9NRM1 1142 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 NLGN3Q9NZ94 848 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 CALML5Q9NZT1 146 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 SEMA5BQ9P283 1151 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 SEC14L3Q9UDX4 400 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 C19orf53Q9UNZ5 99 aaPredicted RBP13.19□□□□□ -0.3
LIMS2-206ENST00000409754 FAM32AQ9Y421 112 aaKnown RBP13.19□□□□□ -0.3
LIMS2-206ENST00000409754 TESMINQ9Y4I5 508 aa13.19□□□□□ -0.3
LIMS2-206ENST00000409754 COL27A1Q8IZC6 1860 aaPredicted RBP13.19□□□□□ -0.3
LIMS2-206ENST00000409754 ASXL3Q9C0F0 2248 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 A0A0A6YYC8 382 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-206ENST00000409754 LY6G6EA0A0G2JKS1 128 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 FAM227AF5H4B4 570 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 I3L1I5 382 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-206ENST00000409754 SLC16A6O15403 523 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 B4GAT1O43505 415 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 PLOD3O60568 738 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 JRKO75564 520 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 MED26O95402 600 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 ITGAMP11215 1152 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 RNH1P13489 461 aaKnown RBP13.18□□□□□ -0.3
LIMS2-206ENST00000409754 SOX18P35713 384 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 MAPK10P53779 464 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 SPIBQ01892 262 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 ID2Q02363 134 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 KCNAB2Q13303 367 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 APOFQ13790 326 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 CYP27C1Q4G0S4 372 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 KCTD21Q4G0X4 260 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 ATAD3BQ5T9A4 648 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 FHL5Q5TD97 284 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 TTC33Q6PID6 262 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-206ENST00000409754 ISLR2Q6UXK2 745 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 ZNF605Q86T29 641 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 OFCC1Q8IZS5 231 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 PIK3C3Q8NEB9 887 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 OR6C4Q8NGE1 309 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 ADAMTS15Q8TE58 950 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 OTUB1Q96FW1 271 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-206ENST00000409754 TRNT1Q96Q11 434 aaKnown RBP13.18□□□□□ -0.3
LIMS2-206ENST00000409754 YTHDF1Q9BYJ9 559 aaKnown RBP13.18□□□□□ -0.3
LIMS2-206ENST00000409754 ANKRA2Q9H9E1 313 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 EQTNQ9NQ60 294 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 GIN1Q9NXP7 522 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 KCNE3Q9Y6H6 103 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 U3KQA8 63 aa13.18□□□□□ -0.3
LIMS2-206ENST00000409754 MN1Q10571 1320 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 SLC30A4O14863 429 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 FOXD2O60548 495 aaPredicted RBP13.17□□□□□ -0.3
LIMS2-206ENST00000409754 SLC35E2P0CK97 266 aa13.17□□□□□ -0.3
LIMS2-206ENST00000409754 NELFEP18615 380 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms