RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 LPLP06858 475 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 NDUFV2P19404 249 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 F2RP25116 425 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 CERS1P27544 350 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 CX3CR1P49238 355 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 RPA4Q13156 261 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 BBS1Q8NFJ9 593 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 OR52P1PQ8NH57 321 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 C16orf78Q8WTQ4 265 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 MRPL38Q96DV4 380 aaKnown RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 CENPNQ96H22 339 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 TSPAN10Q9H1Z9 355 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 COPZ2Q9P299 210 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 HCSTQ9UBK5 93 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 A8MT66 165 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 PGCP20142 388 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 IMPDH1P20839 514 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 APOFQ13790 326 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 PAN3Q58A45 887 aaKnown RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 RTP2Q5QGT7 225 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ASRGL1Q7L266 308 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 SVOPLQ8N434 492 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 OR5AR1Q8NGP9 310 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 CCDC28BQ9BUN5 200 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 SORBS1Q9BX66 1292 aaKnown RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ABCG2Q9UNQ0 655 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 BCAT2O15382 392 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 PAHP00439 452 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 CD46P15529 392 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 SLC6A11P48066 632 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF280AP59817 542 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 HNRNPA0Q13151 305 aaKnown RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 FBXW12Q6X9E4 464 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 TAS1R1Q7RTX1 841 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 GPRIN1Q7Z2K8 1008 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 FCRL5Q96RD9 977 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 GAREM1Q9H706 876 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 KLHL42Q9P2K6 505 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 FZD9O00144 591 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 LILRB5O75023 590 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF865P0CJ78 1059 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 DEFA4P12838 97 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 RPA2P15927 270 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 IL4RP24394 825 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 MAGEA8P43361 318 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 C2orf76Q3KRA6 126 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 GALNT15Q8N3T1 639 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 SLC37A3Q8NCC5 494 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 RRNAD1Q96FB5 475 aaKnown RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ALOXE3Q9BYJ1 711 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 PCDHB16Q9NRJ7 776 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 SALL3Q9BXA9 1300 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 GXYLT2A0PJZ3 443 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 OR6C6A6NF89 314 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF99A8MXY4 864 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 H7C1Q1 480 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 EDF1O60869 148 aaKnown RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 PPP1R3DO95685 299 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 TPOP07202 933 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 PRKXP51817 358 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 GPR17Q13304 367 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 SLC5A8Q8N695 610 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 KDM1BQ8NB78 822 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 SENP5Q96HI0 755 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 GMLQ99445 158 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 MICU1Q9BPX6 476 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 FZD8Q9H461 694 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 REEP4Q9H6H4 257 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ERVK-19Q9WJR5 959 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 DLG5Q8TDM6 1919 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 BORCS7-ASMTA0A0B4J1R7 106 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 A0A1W2PQ09 198 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ANKRD30BLA7E2S9 258 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 SULT2B1O00204 365 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 B4GAT1O43505 415 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 DIRAS3O95661 229 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 LIPCP11150 499 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 NPR2P20594 1047 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 OR56B2PQ8NGI1 322 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 STOML3Q8TAV4 291 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 BORCS7Q96B45 105 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 OR52B2Q96RD2 323 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 THUMPD1Q9NXG2 353 aaKnown RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 MDC1Q14676 2089 aaKnown RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 NPHS1O60500 1241 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 TCN2P20062 427 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 DRD1P21728 446 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ELAVL3Q14576 367 aaKnown RBP8.01□□□□□ -1.13
SCN9A-203ENST00000409672 TSSK4Q6SA08 328 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 KLHDC8AQ8IYD2 350 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF681Q96N22 645 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 LRRC3Q9BY71 257 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 PLEK2Q9NYT0 353 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 ANKMY1Q9P2S6 941 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 KIF1AQ12756 1690 aa8.01□□□□□ -1.13
SCN9A-203ENST00000409672 FAM72CH0Y354 149 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 LGALS8O00214 317 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 CLIC3O95833 236 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 BMP4P12644 408 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 RBMXP38159 391 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms