RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PNPLA3Q9NST1 481 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 LRBAP50851 2863 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 PLOD3O60568 738 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 CRCPO75575 148 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 HPNP05981 417 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 ANXA4P09525 319 aaPredicted RBP13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 KRT4P19013 534 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 FBXW4P57775 412 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 MRPS22P82650 360 aaKnown RBP13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 SLC18A2Q05940 514 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 IMPG1Q17R60 797 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 SPDYAQ5MJ70 313 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 PRAMEF20Q5VT98 475 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 ZNF585AQ6P3V2 769 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 RNF165Q6ZSG1 346 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 FRMD7Q6ZUT3 714 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 PM20D2Q8IYS1 436 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 CCDC116Q8IYX3 515 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 MARVELD2Q8N4S9 558 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 DOK4Q8TEW6 326 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 C16orf78Q8WTQ4 265 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 TMCO6Q96DC7 493 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 JSRP1Q96MG2 331 aaPredicted RBP13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 RILPQ96NA2 401 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 HBEGFQ99075 208 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 TREX2Q9BQ50 279 aaPredicted RBP13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 ROPN1BQ9BZX4 212 aaPredicted RBP13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 IQCGQ9H095 443 aaKnown RBP13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 ROPN1Q9HAT0 212 aaPredicted RBP13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 SLC35C2Q9NQQ7 365 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 TAS2R9Q9NYW1 312 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 EMCNQ9ULC0 261 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 RNF6Q9Y252 685 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 GPR55Q9Y2T6 319 aaPredicted RBP13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 TIMM22Q9Y584 194 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 CREBBPQ92793 2442 aa13.33□□□□□ -0.28
NIF3L1-205ENST00000409588 APCP25054 2843 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 A0A1W2PS29 197 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 FRG2CA6NGY1 282 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 OR6C70A6NIJ9 312 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 LRRC3CA6NJW4 275 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 NPIPB8E9PQR5 432 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 ZNHIT1O43257 154 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 RSL1D1O76021 490 aaKnown RBP13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 IL3P08700 152 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 IFI6P09912 130 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 RFPL3SP0C7P2 107 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 DDCP20711 480 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 PRPH2P23942 346 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 GDF1P27539 372 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 GCKP35557 465 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 PEX19P40855 299 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 ZFP36L2P47974 494 aaKnown RBP13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 MASP1P48740 699 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 EMDP50402 254 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 RAE1P78406 368 aaKnown RBP13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 ZNF763Q0D2J5 394 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 ERCC6LQ2NKX8 1250 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 TRMT12Q53H54 448 aaKnown RBP13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 ZNF628Q5EBL2 1059 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 NHSL2Q5HYW2 709 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 TCHHL1Q5QJ38 904 aaPredicted RBP13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 LIPMQ5VYY2 423 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 TIGD3Q6B0B8 471 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 FAM111BQ6SJ93 734 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 IKBIPQ70UQ0 350 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 OR52R1Q8NGF1 315 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 OR10Q1Q8NGQ4 319 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 APIPQ96GX9 242 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 NXF5Q9H1B4 397 aaKnown RBP13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 UBQLN3Q9H347 655 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 PFDN4Q9NQP4 134 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 HEY2Q9UBP5 337 aa13.32□□□□□ -0.28
NIF3L1-205ENST00000409588 A0A087WV62 115 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 TTC36A6NLP5 189 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 HSPB2A8KAH6 182 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 SLC28A1O00337 649 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 UBFD1O14562 309 aaKnown RBP13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 TRIM13O60858 407 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 CBR3O75828 277 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 CBX7O95931 251 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 SHBGP04278 402 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 CELA3AP09093 270 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 GLI4P10075 376 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 PRF1P14222 555 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 CHN1P15882 459 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 KIR3DL1P43629 444 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 SLCO1A2P46721 670 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 CDK9P50750 372 aaKnown RBP13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 NUP107P57740 925 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 HMGCS1Q01581 520 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 EFR3AQ14156 821 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 HSPB2Q16082 182 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 C1orf185Q5T7R7 199 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 RIPPLY2Q5TAB7 128 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 CLYBLQ8N0X4 340 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 CCDC63Q8NA47 563 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 ADCY4Q8NFM4 1077 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 OR5M9Q8NGP3 310 aa13.31□□□□□ -0.28
NIF3L1-205ENST00000409588 OR1J4Q8NGS1 313 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms