RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 OR4F3Q6IEY1 312 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 ZCCHC12Q6PEW1 402 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 OPN5Q6U736 354 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 TMEM107Q6UX40 140 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 C16orf47Q6ZP98 133 aaPredicted RBP13.66□□□□□ -0.22
SUMO1-207ENST00000409498 PTRH1Q86Y79 214 aaKnown RBP13.66□□□□□ -0.22
SUMO1-207ENST00000409498 HORMAD2Q8N7B1 307 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 SLC22A8Q8TCC7 542 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 LCORQ96JN0 433 aaPredicted RBP13.66□□□□□ -0.22
SUMO1-207ENST00000409498 SGCZQ96LD1 299 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 SIGLEC12Q96PQ1 595 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 BTBD9Q96Q07 612 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 TRIM4Q9C037 500 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 ANKRA2Q9H9E1 313 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 NPHS2Q9NP85 383 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 FAM120CQ9NX05 1096 aaKnown RBP13.66□□□□□ -0.22
SUMO1-207ENST00000409498 LRFN1Q9P244 771 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 BTNL2Q9UIR0 455 aa13.66□□□□□ -0.22
SUMO1-207ENST00000409498 RALYQ9UKM9 306 aaKnown RBP13.66□□□□□ -0.22
SUMO1-207ENST00000409498 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 FRG2CA6NGY1 282 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 EMC8O43402 210 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 SLC22A3O75751 556 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 IL6P05231 212 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 VIMP08670 466 aaKnown RBP13.65□□□□□ -0.22
SUMO1-207ENST00000409498 FBXO45P0C2W1 286 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 CT45A8P0DMV1 189 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 CT45A9P0DMV2 189 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 TROVE2P10155 538 aaKnown RBP eCLIP13.65□□□□□ -0.22
SUMO1-207ENST00000409498 CDK9P50750 372 aaKnown RBP13.65□□□□□ -0.22
SUMO1-207ENST00000409498 PSG6Q00889 435 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 OR1C1Q15619 314 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 INAQ16352 499 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 ZNF791Q3KP31 576 aaPredicted RBP13.65□□□□□ -0.22
SUMO1-207ENST00000409498 CT45A2Q5DJT8 189 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 MSANTD1Q6ZTZ1 278 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 TAGAPQ8N103 731 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 MIER2Q8N344 545 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 TMEM156Q8N614 296 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 GOLM1Q8NBJ4 401 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 VPS37AQ8NEZ2 397 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 GOT1L1Q8NHS2 421 aaPredicted RBP13.65□□□□□ -0.22
SUMO1-207ENST00000409498 ASB15Q8WXK1 588 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 MOAP1Q96BY2 351 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 GIMAP5Q96F15 307 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 GAL3ST4Q96RP7 486 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 ZBTB18Q99592 522 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 LMF2Q9BU23 707 aaKnown RBP13.65□□□□□ -0.22
SUMO1-207ENST00000409498 ITPAQ9BY32 194 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 NXF5Q9H1B4 397 aaKnown RBP13.65□□□□□ -0.22
SUMO1-207ENST00000409498 ZNF385DQ9H6B1 395 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 FOLH1BQ9HBA9 442 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 C3orf14Q9HBI5 128 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 SH2D2AQ9NP31 389 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 DDX18Q9NVP1 670 aaKnown RBP13.65□□□□□ -0.22
SUMO1-207ENST00000409498 KLHL14Q9P2G3 628 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 DCTN4Q9UJW0 460 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 ERVK-11Q9UQG0 969 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 PCDHGA10Q9Y5H3 936 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 CHD6Q8TD26 2715 aa13.65□□□□□ -0.22
SUMO1-207ENST00000409498 NUP214P35658 2090 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-207ENST00000409498 A8MVJ9 347 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 OR6B1O95007 311 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 C6orf47O95873 294 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 PRB1P04280 392 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 PGRP06401 933 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 SP1P08047 785 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 S100A3P33764 101 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 GPC1P35052 558 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 SOX3P41225 446 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 NR0B1P51843 470 aaKnown RBP13.64□□□□□ -0.23
SUMO1-207ENST00000409498 HBA1P69905 142 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 NTRK2Q16620 822 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 PGS1Q32NB8 556 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 FAM174BQ3ZCQ3 159 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 SPINK14Q6IE38 97 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 SLC25A25Q6KCM7 469 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 NUP43Q8NFH3 380 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 SFXN5Q8TD22 340 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 SPACA9Q96E40 222 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-207ENST00000409498 FAM120BQ96EK7 910 aaKnown RBP13.64□□□□□ -0.23
SUMO1-207ENST00000409498 CHMP6Q96FZ7 201 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 CCDC115Q96NT0 180 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 TMEM120AQ9BXJ8 343 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 MFRPQ9BY79 579 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.64□□□□□ -0.239e-11■■■■□ 24.6
SUMO1-207ENST00000409498 CXorf36Q9H7Y0 433 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 HPF1Q9NWY4 346 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 GIN1Q9NXP7 522 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 MAP10Q9P2G4 905 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 TRIM33Q9UPN9 1127 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 NPFFR2Q9Y5X5 522 aa13.64□□□□□ -0.23
SUMO1-207ENST00000409498 SMG1Q96Q15 3661 aaKnown RBP13.63□□□□□ -0.23
SUMO1-207ENST00000409498 A0A0G2JND7 137 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 FAM234BA2RU67 622 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 EIF4E1BA6NMX2 242 aaKnown RBP13.63□□□□□ -0.23
SUMO1-207ENST00000409498 CAPN14A8MX76 684 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 ERN1O75460 977 aaKnown RBP13.63□□□□□ -0.23
SUMO1-207ENST00000409498 SOX30O94993 753 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 F10P00742 488 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms