RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 MDFIC2A0A1B0GVS7 189 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 H3BML4 177 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 WNT7AO00755 349 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 ZNF208O43345 1280 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 OR12D1P0DN82 309 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 TSPAN8P19075 237 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 PTGR1Q14914 329 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 ABCA11PQ4W5N1 156 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 RBM48Q5RL73 367 aaKnown RBP6.94□□□□□ -1.3
SCN9A-202ENST00000409435 ZNF782Q6ZMW2 699 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-202ENST00000409435 OR2L8Q8NGY9 312 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 GPER1Q99527 375 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 DPH2Q9BQC3 489 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-202ENST00000409435 EIF5A2Q9GZV4 153 aaKnown RBP6.94□□□□□ -1.3
SCN9A-202ENST00000409435 NANOGQ9H9S0 305 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 SAMD4AQ9UPU9 718 aaKnown RBP6.94□□□□□ -1.3
SCN9A-202ENST00000409435 A0A0A6YYC8 382 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-202ENST00000409435 LOC102723532A0A0G2JNH3 316 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 E9PI62 339 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 I3L1I5 382 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-202ENST00000409435 AURKAO14965 403 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 ZNF749O43361 778 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 PCDH7O60245 1069 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 DDAH2O95865 285 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 GNALP38405 381 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 DNASE1L1P49184 302 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 VLDLRP98155 873 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 PDE7AQ13946 482 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 CDKAL1Q5VV42 579 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 PM20D1Q6GTS8 502 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 LANCL3Q6ZV70 420 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 ZC3HC1Q86WB0 502 aaKnown RBP6.94□□□□□ -1.3
SCN9A-202ENST00000409435 ZDHHC16Q969W1 377 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 PYCR2Q96C36 320 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 COG8Q96MW5 612 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 FUZQ9BT04 418 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 SCNM1Q9BWG6 230 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 FUNDC2Q9BWH2 189 aa6.94□□□□□ -1.3
SCN9A-202ENST00000409435 NLE1Q9NVX2 485 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-202ENST00000409435 BLACEA4D250 179 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 EPOPA6NHQ4 379 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 GABRR3A8MPY1 467 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 FADS2P1A8MWK0 482 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 PRSS44E7EML9 344 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 K7EPI3 171 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 EPOP01588 193 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 IRF9Q00978 393 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 SCAPQ12770 1279 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 GPR68Q15743 365 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 ZBED5Q49AG3 693 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 PMM1Q92871 262 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 KLHL15Q96M94 604 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 OR10A4Q9H209 315 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 STARD5Q9NSY2 213 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 GPRC5BQ9NZH0 403 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 DTLQ9NZJ0 730 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 BTRCQ9Y297 605 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 TRAF6Q9Y4K3 522 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 SSC5DA1L4H1 1573 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 CACNA1FO60840 1977 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 PMM2O15305 246 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 RGS9O75916 674 aaPredicted RBP6.93□□□□□ -1.3
SCN9A-202ENST00000409435 PIAS2O75928 621 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 H6PDO95479 791 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 KLK1P06870 262 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 ZSCAN5DPP0CG00 497 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 PGAM2P15259 253 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 BCKDHBP21953 392 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 IGFBP5P24593 272 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 S100A10P60903 97 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 SIRPAP78324 504 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 SHC2P98077 582 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 PRKCDQ05655 676 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 KEAP1Q14145 624 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 TPRG1LQ5T0D9 272 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 ARSKQ6UWY0 536 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 TMEM184AQ6ZMB5 413 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 ZNF765Q7L2R6 523 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 TICAM1Q8IUC6 712 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 OR52E1Q8NGJ3 308 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 PEX13Q92968 403 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 ZNF597Q96LX8 424 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 ALPK1Q96QP1 1244 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 SLC22A12Q96S37 553 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 PCDHB18PQ96TA0 734 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 MTERF1Q99551 399 aaKnown RBP6.93□□□□□ -1.3
SCN9A-202ENST00000409435 MENTQ9BUN1 341 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 IFT27Q9BW83 186 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 SNTG1Q9NSN8 517 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 ZNF226Q9NYT6 803 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 OR6C2Q9NZP2 312 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 XIRP1Q702N8 1843 aaKnown RBP6.93□□□□□ -1.3
SCN9A-202ENST00000409435 ACOX3O15254 700 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 RENP00797 406 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 CSTBP04080 98 aaKnown RBP6.93□□□□□ -1.3
SCN9A-202ENST00000409435 MPC1LP0DKB6 136 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 SPINK2P20155 84 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 OR1D4P47884 311 aa6.93□□□□□ -1.3
SCN9A-202ENST00000409435 RPS13P62277 151 aaKnown RBP6.93□□□□□ -1.3
SCN9A-202ENST00000409435 CHRNEQ04844 493 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms