RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MAP10Q9P2G4 905 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 USH1CQ9Y6N9 552 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 GCN1Q92616 2671 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 UPK1AO00322 258 aa18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 DRD5P21918 477 aa18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 PPICP45877 212 aa18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 NRG3P56975 720 aa18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 HSPB3Q12988 150 aa18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 PSD4Q8NDX1 1056 aa18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 DNAJB8Q8NHS0 232 aa18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 FAR1Q8WVX9 515 aa18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 LCORQ96JN0 433 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 VSTM2LQ96N03 204 aa18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 NXF5Q9H1B4 397 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 DDX18Q9NVP1 670 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 KLF13Q9Y2Y9 288 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-207ENST00000409417 ASPDHA6ND91 283 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 ANKRD28O15084 1053 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 ACOX3O15254 700 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 COQ9O75208 318 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 TGDSO95455 350 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 CRYABP02511 175 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 ALDOCP09972 364 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 MLC1Q15049 377 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 SLC9B1Q4ZJI4 515 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 TMEM64Q6YI46 380 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 CAMKMTQ7Z624 323 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 ARFGAP2Q8N6H7 521 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 NUDT8Q8WV74 236 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 HSPBAP1Q96EW2 488 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 BTBD9Q96Q07 612 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 DPY30Q9C005 99 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 BHLHE41Q9C0J9 482 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 GPR55Q9Y2T6 319 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 NPFFR2Q9Y5X5 522 aa18.31■□□□□ 0.52
PDLIM2-207ENST00000409417 SHANK1Q9Y566 2161 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 SVILO95425 2214 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 FRG2CA6NGY1 282 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 CAPN14A8MX76 684 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 KLRC4-KLRK1H3BQV0 150 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 PSMG1O95456 288 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 GPC1P35052 558 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 ZNF324BQ6AW86 544 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 NXNQ6DKJ4 435 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 EPGNQ6UW88 154 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 FAM47EQ6ZV65 393 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 SULF2Q8IWU5 870 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 FAM98AQ8NCA5 519 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 GALNT11Q8NCW6 608 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 CEP70Q8NHQ1 597 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 DUSP26Q9BV47 211 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 SH2D2AQ9NP31 389 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 OLAHQ9NV23 265 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 AIG1Q9NVV5 245 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 NTMQ9P121 344 aa18.3■□□□□ 0.52
PDLIM2-207ENST00000409417 A0A1W2PRB8 838 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 TO15178 435 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 DIAPH2O60879 1101 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 NME6O75414 186 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 ERN1O75460 977 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 NAGAP17050 411 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 EFNA1P20827 205 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 ABCD3P28288 659 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 TMED10P49755 219 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 CLNS1AP54105 237 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 PSPHP78330 225 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 NNATQ16517 81 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 NTRK2Q16620 822 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 ATCAYQ86WG3 371 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 TESCQ96BS2 214 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 MAGED4Q96JG8 741 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 FOLH1BQ9HBA9 442 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 GPR45Q9Y5Y3 372 aa18.29■□□□□ 0.52
PDLIM2-207ENST00000409417 PEX1O43933 1283 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 CT45A8P0DMV1 189 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 CT45A9P0DMV2 189 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 IDO1P14902 403 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 CDK9P50750 372 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 CORO7P57737 925 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 PMP22Q01453 160 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 SRSF11Q05519 484 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 PGS1Q32NB8 556 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 LSM12Q3MHD2 195 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 CT45A2Q5DJT8 189 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 SLC22A10Q63ZE4 541 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 FAM13CQ8NE31 585 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 OR10G3Q8NGC4 313 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 OR8J2Q8NGG1 315 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 PSMA8Q8TAA3 256 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 PAQR8Q8TEZ7 354 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 OR5P2Q8WZ92 322 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 NR4A3Q92570 626 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 FRMD6Q96NE9 622 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 OR52B2Q96RD2 323 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 SLX1AQ9BQ83 275 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 SACM1LQ9NTJ5 587 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 DEPPQ9NTK1 212 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 VPS4AQ9UN37 437 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 CHCHD2Q9Y6H1 151 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms