RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ZDHHC24Q6UX98 284 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 CAMKMTQ7Z624 323 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 KIF18BQ86Y91 864 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 PRR22Q8IZ63 422 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 C17orf47Q8NEP4 570 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 OR7G1Q8NGA0 311 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 ABTB1Q969K4 478 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 ATP6V1E2Q96A05 226 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 MBD6Q96DN6 1003 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 MRRFQ96E11 262 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 WDYHV1Q96HA8 205 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 TMEM41AQ96HV5 264 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 GPR78Q96P69 363 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 ALPK1Q96QP1 1244 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 TRIB1Q96RU8 372 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 UGT2B28Q9BY64 529 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 RAB17Q9H0T7 212 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 NOL11Q9H8H0 719 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 CALHM2Q9HA72 323 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 TEX10Q9NXF1 929 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 AHSPQ9NZD4 102 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 CPSF2Q9P2I0 782 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 ADAM29Q9UKF5 820 aa8.37□□□□□ -1.07
NIF3L1-203ENST00000409129 NINQ8N4C6 2090 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 MBD3L4A6NDZ8 208 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 MBD3L3A6NE82 208 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 MBD3L5A6NJ08 208 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 GNB5O14775 395 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 PPM1BO75688 479 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 IL18BPO95998 194 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 CPMP14384 443 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 NT5EP21589 574 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 GPX3P22352 226 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 ABCD3P28288 659 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 PTPN6P29350 595 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 TYK2P29597 1187 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 OPRM1P35372 400 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 ARL1P40616 181 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 CCNG1P51959 295 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 AGFG1P52594 562 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 NAGLUP54802 743 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 EIPR1Q53HC9 387 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 WIPI1Q5MNZ9 446 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 DCST1Q5T197 706 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 CCNYL2Q5T2Q4 361 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 FBXW10Q5XX13 1052 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 FRG2Q64ET8 278 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 TIGD3Q6B0B8 471 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 TTC19Q6DKK2 380 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 SLC30A6Q6NXT4 461 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 TMEM81Q6P7N7 255 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 PAGE2Q7Z2X7 111 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 NUP54Q7Z3B4 507 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 KRTAP1-3Q8IUG1 177 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 PTGR2Q8N8N7 351 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 OR52B6Q8NGF0 335 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 OR1J4Q8NGS1 313 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 MBD3L2Q8NHZ7 208 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 LINC01560Q8TB33 94 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 ZPLD1Q8TCW7 415 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 TRPC4APQ8TEL6 797 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 FRG2BQ96QU4 278 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 NTMT1Q9BV86 223 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 NXF5Q9H1B4 397 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 JKAMPQ9P055 326 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 FETUBQ9UGM5 382 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 CES1P1Q9UKY3 287 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 PYCARDQ9ULZ3 195 aa8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 ANK3Q12955 4377 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-203ENST00000409129 C1orf226A1L170 272 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 ICOSLGO75144 302 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 GUCY1B2O75343 617 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 ATE1O95260 518 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 ACTL6AO96019 429 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 RAF1P04049 648 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 ALDOAP04075 364 aaKnown RBP8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 RBP1P09455 135 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 CPN1P15169 458 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 DEKP35659 375 aaKnown RBP8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 SERPINB8P50452 374 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 MAPK12P53778 367 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 SORDQ00796 357 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 MGAT2Q10469 447 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 MAP4K2Q12851 820 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 IFT88Q13099 833 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 SNTA1Q13424 505 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 RCAN2Q14206 197 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 UAP1Q16222 522 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 PRICKLE4Q2TBC4 344 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 TECRLQ5HYJ1 363 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 C10orf62Q5T681 223 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 SLC48A1Q6P1K1 146 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 FAM111BQ6SJ93 734 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 ANGPTL8Q6UXH0 198 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 PAMR1Q6UXH9 720 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 YRDCQ86U90 279 aaKnown RBP8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 PHC2Q8IXK0 858 aa8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 PLD6Q8N2A8 252 aaKnown RBP8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 CIARTQ8N365 385 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-203ENST00000409129 VWA5B2Q8N398 1253 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms