RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ITPAQ9BY32 194 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 RMND5AQ9H871 391 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 FOLH1BQ9HBA9 442 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 ZCCHC3Q9NUD5 404 aaKnown RBP27.18■■□□□ 1.94
USP42-202ENST00000404008 ARL2BPQ9Y2Y0 163 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 PCDHGB7Q9Y5F8 929 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 BSNQ9UPA5 3926 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 DYTNA2CJ06 578 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 ASPDHA6ND91 283 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 ADSLP30566 484 aaPredicted RBP27.17■■□□□ 1.94
USP42-202ENST00000404008 CCT3P49368 545 aaKnown RBP27.17■■□□□ 1.94
USP42-202ENST00000404008 SZRD1Q7Z422 152 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 MTDHQ86UE4 582 aaKnown RBP27.17■■□□□ 1.94
USP42-202ENST00000404008 BEST3Q8N1M1 668 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 EXD3Q8N9H8 876 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 C17orf47Q8NEP4 570 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 MOAP1Q96BY2 351 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 MS4A4EQ96PG1 132 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 STMN3Q9NZ72 180 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 LHX6Q9UPM6 363 aa27.17■■□□□ 1.94
USP42-202ENST00000404008 CACNA1BQ00975 2339 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 GIMAP1-GIMAP5A0A087WTJ2 511 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 K7EM74 188 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 WWP2O00308 870 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 SLC22A2O15244 555 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 ITGA10O75578 1167 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 OR2J2O76002 312 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 PDGFAP04085 211 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 SOAT1P35610 550 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 CDKN2CP42773 168 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 PRKAG1P54619 331 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 SPDYE7PQ495Y7 208 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 HLA-DQA1Q5Y7H0 255 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 PCSK4Q6UW60 755 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 TP53INP1Q96A56 240 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 GIMAP5Q96F15 307 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 ITCHQ96J02 903 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 ARMCX1Q9P291 453 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 TP53TG5Q9Y2B4 290 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 YARS2Q9Y2Z4 477 aaKnown RBP27.16■■□□□ 1.94
USP42-202ENST00000404008 IGSF10Q6WRI0 2623 aa27.16■■□□□ 1.94
USP42-202ENST00000404008 A0A1W2PP18 115 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 TLR1Q15399 786 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 GKAP1Q5VSY0 366 aaPredicted RBP27.15■■□□□ 1.94
USP42-202ENST00000404008 SLC2A7Q6PXP3 512 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 OR56A1Q8NGH5 318 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 OR5AK3PQ8NH89 298 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 C9orf43Q8TAL5 461 aaPredicted RBP27.15■■□□□ 1.94
USP42-202ENST00000404008 TSPEARQ8WU66 669 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 GTF2H4Q92759 462 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 BTBD9Q96Q07 612 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 EPS8L2Q9H6S3 715 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 ZNF451Q9Y4E5 1061 aa27.15■■□□□ 1.94
USP42-202ENST00000404008 RFXANKO14593 260 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 SNRPB2P08579 225 aaKnown RBP27.14■■□□□ 1.94
USP42-202ENST00000404008 PPICP45877 212 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 DCAF7P61962 342 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 ZNF155Q12901 538 aaPredicted RBP27.14■■□□□ 1.94
USP42-202ENST00000404008 GAB1Q13480 694 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 PIGGQ5H8A4 983 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 IGFL3Q6UXB1 125 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 CLEC4FQ8N1N0 589 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 WBP1Q96G27 269 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 RASL10BQ96S79 203 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 RNF32Q9H0A6 362 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 NXF5Q9H1B4 397 aaKnown RBP27.14■■□□□ 1.94
USP42-202ENST00000404008 MYLK2Q9H1R3 596 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 EQTNQ9NQ60 294 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 ABI3Q9P2A4 366 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 VPS4AQ9UN37 437 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 GPR55Q9Y2T6 319 aaPredicted RBP27.14■■□□□ 1.94
USP42-202ENST00000404008 CAPN7Q9Y6W3 813 aa27.14■■□□□ 1.94
USP42-202ENST00000404008 RNF103-CHMP3A0A140T963 221 aa27.13■■□□□ 1.93
USP42-202ENST00000404008 ZNF354AO60765 605 aaPredicted RBP27.13■■□□□ 1.93
USP42-202ENST00000404008 ERN1O75460 977 aaKnown RBP27.13■■□□□ 1.93
USP42-202ENST00000404008 NADKO95544 446 aaPredicted RBP27.13■■□□□ 1.93
USP42-202ENST00000404008 DRD5P21918 477 aa27.13■■□□□ 1.93
USP42-202ENST00000404008 UQCRC2P22695 453 aa27.13■■□□□ 1.93
USP42-202ENST00000404008 NR0B1P51843 470 aaKnown RBP27.13■■□□□ 1.93
USP42-202ENST00000404008 TP53BP2Q13625 1128 aa27.13■■□□□ 1.93
USP42-202ENST00000404008 MFSD12Q6NUT3 480 aa27.13■■□□□ 1.93
USP42-202ENST00000404008 MTERF4Q7Z6M4 381 aaKnown RBP27.13■■□□□ 1.93
USP42-202ENST00000404008 ANKS4BQ8N8V4 417 aa27.13■■□□□ 1.93
USP42-202ENST00000404008 HOXB13Q92826 284 aaPredicted RBP27.13■■□□□ 1.93
USP42-202ENST00000404008 LCORQ96JN0 433 aaPredicted RBP27.13■■□□□ 1.93
USP42-202ENST00000404008 CCDC106Q9BWC9 280 aa27.13■■□□□ 1.93
USP42-202ENST00000404008 SLC6A13Q9NSD5 602 aa27.13■■□□□ 1.93
USP42-202ENST00000404008 EXPH5Q8NEV8 1989 aa27.13■■□□□ 1.93
USP42-202ENST00000404008 WDPCPO95876 746 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 HMGN2P05204 90 aaKnown RBP27.12■■□□□ 1.93
USP42-202ENST00000404008 GSNP06396 782 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 CT45A8P0DMV1 189 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 CT45A9P0DMV2 189 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 TRHRP34981 398 aaPredicted RBP27.12■■□□□ 1.93
USP42-202ENST00000404008 TRPC1P48995 793 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 SSR4P51571 173 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 CORO7P57737 925 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 NNATQ16517 81 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 CT45A2Q5DJT8 189 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 PAGE3Q5JUK9 113 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms