RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	PLEKHA6	Q9Y2H5	1048 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	L3MBTL1	Q9Y468	752 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	EPN1	Q9Y6I3	576 aa	Predicted RBP	6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SPG11	Q96JI7	2443 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CELSR1	Q9NYQ6	3014 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CENPVL1	A0A0U1RR11	272 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461		A0A1W2PS29	197 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FEZF1	A0PJY2	475 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461		A8MUA0	341 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NPIPB8	E9PQR5	432 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GFY	I3L273	518 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CLDN4	O14493	209 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	OR1F1	O43749	312 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	WDR1	O75083	606 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZFAND5	O76080	213 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MYO1D	O94832	1006 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ABHD16A	O95870	558 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FTCD	O95954	541 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RAF1	P04049	648 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CDH1	P12830	882 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RNH1	P13489	461 aa	Known RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GABRA1	P14867	456 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MAK	P20794	623 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MAOA	P21397	527 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZNF10	P21506	573 aa	Predicted RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	UQCRC1	P31930	480 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RGS4	P49798	205 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	OLR1	P78380	273 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CDK16	Q00536	496 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	LTB	Q06643	244 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TBX2	Q13207	712 aa	Predicted RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SNX1	Q13596	522 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KEAP1	Q14145	624 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	OASL	Q15646	514 aa	Known RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GXYLT1	Q4G148	440 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	WLS	Q5T9L3	541 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HECTD2	Q5U5R9	776 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZNF470	Q6ECI4	717 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	LCTL	Q6UWM7	567 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PAMR1	Q6UXH9	720 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KIAA0408	Q6ZU52	694 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PIWIL4	Q7Z3Z4	852 aa	Known RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CLNK	Q7Z7G1	428 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	LMNTD2	Q8IXW0	634 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FAM109A	Q8N4B1	249 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TC2N	Q8N9U0	490 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZNF740	Q8NDX6	193 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	B3GNT7	Q8NFL0	401 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	OR5T3	Q8NGG3	340 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	POC1B	Q8TC44	478 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FAM222B	Q8WU58	562 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	APIP	Q96GX9	242 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FAR2	Q96K12	515 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TTYH2	Q9BSA4	534 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TRIM5	Q9C035	493 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RASSF1	Q9NS23	344 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PNPLA3	Q9NST1	481 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SYBU	Q9NX95	663 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ETAA1	Q9NY74	926 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MTRF1L	Q9UGC7	380 aa	Known RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TRMT6	Q9UJA5	497 aa	Known RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FBXO9	Q9UK97	447 aa	Predicted RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PACSIN2	Q9UNF0	486 aa	Predicted RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MRPS33	Q9Y291	106 aa	Known RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	YARS2	Q9Y2Z4	477 aa	Known RBP	6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MMACHC	Q9Y4U1	282 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MAD1L1	Q9Y6D9	718 aa		6.23	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MYO7B	Q6PIF6	2116 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NAV3	Q8IVL0	2385 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	IGKV3D-11	A0A0A0MRZ8	115 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TRBC2	A0A5B9	178 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MAGEB16	A2A368	324 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461		A6NNC1	897 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HSPB2	A8KAH6	182 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461		M0QYG6	137 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SLC16A5	O15375	505 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PROM1	O43490	865 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZFPL1	O95159	310 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SPDEF	O95238	335 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461		P04436	131 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZSCAN5DP	P0CG00	497 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TPSB2	P20231	275 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PEX2	P28328	305 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HPD	P32754	393 aa	Predicted RBP	6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RPL22	P35268	128 aa	Known RBP	6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ANXA11	P50995	505 aa	Known RBP	6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	BTG2	P78543	158 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SLC13A2	Q13183	592 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NAE1	Q13564	534 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	DHX34	Q14147	1143 aa	Known RBP	6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RCN2	Q14257	317 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TPSAB1	Q15661	275 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HSPB2	Q16082	182 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	DEFB113	Q30KQ7	82 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	C1orf185	Q5T7R7	199 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	AGTRAP	Q6RW13	159 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CES3	Q6UWW8	571 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CLEC9A	Q6UXN8	241 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HSDL2	Q6YN16	418 aa		6.22	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RTL4	Q6ZR62	310 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms