RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CMTM7Q96FZ5 175 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TMEM204Q9BSN7 226 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OSBPL11Q9BXB4 747 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 REG4Q9BYZ8 158 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DERL2Q9GZP9 239 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 METTL7AQ9H8H3 244 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RNF112Q9ULX5 631 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MTO1Q9Y2Z2 717 aaKnown RBP10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PKD1L1Q8TDX9 2849 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CAPN14A8MX76 684 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 C16orf97H3BN30 126 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OVOL3O00110 214 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TP73O15350 636 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PHGDHO43175 533 aaKnown RBP10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CD5LO43866 347 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CCNT2O60583 730 aaKnown RBP10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 NME6O75414 186 aaPredicted RBP10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 THBS1P07996 1170 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CTAGE8P0CG41 777 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 NR2F6P10588 404 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 POU2F1P14859 743 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SUCLG1P53597 346 aaKnown RBP10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DLG1Q12959 904 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 LAPTM5Q13571 262 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FASTKD3Q14CZ7 662 aaKnown RBP10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 KBTBD12Q3ZCT8 623 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SULT1C3Q6IMI6 304 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MED27Q6P2C8 311 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DNM1P46Q6ZS02 220 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SH2D5Q6ZV89 423 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CTAGE4Q8IX94 777 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SPC24Q8NBT2 197 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TMEM171Q8WVE6 324 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RGMAQ96B86 450 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OMA1Q96E52 524 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MTERF1Q99551 399 aaKnown RBP10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PELOQ9BRX2 385 aaKnown RBP10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ITPAQ9BY32 194 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 KRTAP3-2Q9BYR7 98 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CD244Q9BZW8 370 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DDX31Q9H8H2 851 aaKnown RBP10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 YAE1D1Q9NRH1 226 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RYDENQ9NUL5 291 aaKnown RBP10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MS4A12Q9NXJ0 267 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TAS2R10Q9NYW0 307 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PHF11Q9UIL8 331 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DLGAP4Q9Y2H0 992 aa10.72□□□□□ -0.69
SPTLC1P3-201ENST00000403408 A0A096LNT2 108 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PRAMEF25A6NGN4 478 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 HS3ST1O14792 307 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 WIPF1O43516 503 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GPRIN2O60269 458 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 NDUFS7O75251 213 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CBR3O75828 277 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CRHP06850 196 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SOD3P08294 240 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RHOXF2BP0C7M4 288 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FAM58BPP0C7Q3 252 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CCDC166P0CW27 439 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CHMP24386 653 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SRD5A2P31213 254 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GAS1P54826 345 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 HMGCS1Q01581 520 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 VEZF1Q14119 521 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FRG1Q14331 258 aaKnown RBP10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 EXOSC7Q15024 291 aaKnown RBP10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 HIST2H2ACQ16777 129 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PAGE2BQ5JRK9 111 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CDKL4Q5MAI5 379 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FAM219BQ5XKK7 198 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 HIST2H2AA3Q6FI13 130 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR5M10Q6IEU7 315 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SLC30A6Q6NXT4 461 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ENPP6Q6UWR7 440 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 NUP54Q7Z3B4 507 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 IFNEQ86WN2 208 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ANKMY2Q8IV38 441 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GALNT12Q8IXK2 581 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TCAIMQ8N3R3 496 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZNF611Q8N823 705 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 C17orf47Q8NEP4 570 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RAB3IL1Q8TBN0 382 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RNF138Q8WVD3 245 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 NAT9Q9BTE0 207 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ACBD3Q9H3P7 528 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ACTR8Q9H981 624 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MOCS1Q9NZB8 636 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZNF639Q9UID6 485 aa10.71□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SLC22A20A6NK97 555 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CXorf49A8MYA2 514 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CBX7O95931 251 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 NAGAP17050 411 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TLX1P31314 330 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ACVR1BP36896 505 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 BUD31P41223 144 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TMED10P49755 219 aaKnown RBP10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 MGAT5Q09328 741 aa10.7□□□□□ -0.7
SPTLC1P3-201ENST00000403408 HLA-DQA1Q5Y7H0 255 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms