RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 YIF1BQ5BJH7 314 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 ZNF628Q5EBL2 1059 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 ANKRA2Q9H9E1 313 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 PLSCR3Q9NRY6 295 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 SF3B6Q9Y3B4 125 aaKnown RBP18.71■□□□□ 0.59
CCDC47-202ENST00000403162 A0A0B4J293 547 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 TMEM129A0AVI4 362 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 IRGMA1A4Y4 181 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 OTOL1A6NHN0 477 aaPredicted RBP18.7■□□□□ 0.58
CCDC47-202ENST00000403162 PLA2G10O15496 165 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 MBTPS2O43462 519 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 SH3BP5O60239 455 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 SOD1P00441 154 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 MYL12AP19105 171 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 MMP11P24347 488 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 HLA-DMAP28067 261 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 GIPRP48546 466 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 CDK5Q00535 292 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 TPBGQ13641 420 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 GINS1Q14691 196 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 SPDYE7PQ495Y7 208 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 PYDC2Q56P42 97 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 KHDRBS2Q5VWX1 349 aaKnown RBP18.7■□□□□ 0.58
CCDC47-202ENST00000403162 QSOX2Q6ZRP7 698 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 ZNF438Q7Z4V0 828 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 KIAA0907Q7Z7F0 614 aaPredicted RBP18.7■□□□□ 0.58
CCDC47-202ENST00000403162 TRAPPC5Q8IUR0 188 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 TMEM203Q969S6 136 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 RNF31Q96EP0 1072 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 DTD2Q96FN9 168 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 TREX2Q9BQ50 279 aaPredicted RBP18.7■□□□□ 0.58
CCDC47-202ENST00000403162 KATNB1Q9BVA0 655 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 RHBGQ9H310 441 aa18.7■□□□□ 0.58
CCDC47-202ENST00000403162 FGF20Q9NP95 211 aaPredicted RBP18.7■□□□□ 0.58
CCDC47-202ENST00000403162 ALX3O95076 343 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 HLA-DQB1P01920 261 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 NR2F6P10588 404 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 ACADLP28330 430 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 GDI1P31150 447 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 GPC1P35052 558 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 BSGP35613 385 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 KIR2DL3P43628 341 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 DMPKQ09013 629 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 HSPB3Q12988 150 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 PIN1Q13526 163 aaPredicted RBP18.69■□□□□ 0.58
CCDC47-202ENST00000403162 ZNF730Q6ZMV8 503 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 ZER1Q7Z7L7 766 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 TBC1D19Q8N5T2 526 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 GRPEL2Q8TAA5 225 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 CYB5D2Q8WUJ1 264 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 HLA-CQ95604 372 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 ZNF764Q96H86 408 aaPredicted RBP18.69■□□□□ 0.58
CCDC47-202ENST00000403162 LRIG1Q96JA1 1093 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 COQ10AQ96MF6 247 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 FYTTD1Q96QD9 318 aaKnown RBP18.69■□□□□ 0.58
CCDC47-202ENST00000403162 TRMT61BQ9BVS5 477 aaKnown RBP18.69■□□□□ 0.58
CCDC47-202ENST00000403162 ABCG4Q9H172 646 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 SLC30A4O14863 429 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 SLC28A2O43868 658 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 ACP2P11117 423 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 RPS25P62851 125 aaKnown RBP18.69■□□□□ 0.58
CCDC47-202ENST00000403162 CHRNEQ04844 493 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 RAB40BQ12829 278 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 QPRTQ15274 297 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.69■□□□□ 0.582e-7■■■□□ 16
CCDC47-202ENST00000403162 LCN1P1Q5VSP4 162 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 ACSM5Q6NUN0 579 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 TRMT11Q7Z4G4 463 aaKnown RBP18.69■□□□□ 0.58
CCDC47-202ENST00000403162 OR4K5Q8NGD3 323 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 OR2AG1Q9H205 316 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 DPEP2Q9H4A9 486 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 SERHL2Q9H4I8 314 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 P2RX2Q9UBL9 471 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 ITM2BQ9Y287 266 aa18.69■□□□□ 0.58
CCDC47-202ENST00000403162 C17orf113A0A1B0GUU1 675 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 HCN1O60741 890 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 FHP07954 510 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 CPN2P22792 545 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 FGF9P31371 208 aaPredicted RBP18.68■□□□□ 0.58
CCDC47-202ENST00000403162 NNMTP40261 264 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 SMSP52788 366 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 PPP3R1P63098 170 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 HTR4Q13639 388 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 RUNX3Q13761 415 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 POM121L1PQ3SYA9 428 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 ENTPD8Q5MY95 495 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 C1orf94Q6P1W5 598 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 C12orf40Q86WS4 652 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 LIX1LQ8IVB5 337 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 TCTE3Q8IZS6 198 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 ENKURQ8TC29 256 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 SORCS1Q8WY21 1168 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 TM9SF4Q92544 642 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 ZBED6CLQ96FA7 236 aaPredicted RBP18.68■□□□□ 0.58
CCDC47-202ENST00000403162 LINC00615Q96LM1 132 aaPredicted RBP18.68■□□□□ 0.58
CCDC47-202ENST00000403162 FNDC11Q9BVV2 318 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 MS4A8Q9BY19 250 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 MAN2C1Q9NTJ4 1040 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 FBXW2Q9UKT8 454 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 PRAMEF27A3QJZ7 478 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms