RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 FAM173AQ9BQD7 235 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 MECRQ9BV79 373 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 FAIM2Q9BWQ8 316 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 GATA5Q9BWX5 397 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 BRINP2Q9C0B6 783 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 NXF5Q9H1B4 397 aaKnown RBP5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 OR10A5Q9H207 317 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 ANKRA2Q9H9E1 313 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 PROK2Q9HC23 129 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 PFDN4Q9NQP4 134 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 SACM1LQ9NTJ5 587 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 OXSMQ9NWU1 459 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 NMRK1Q9NWW6 199 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 MAT2BQ9NZL9 334 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC17A7Q9P2U7 560 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 TNFRSF10DQ9UBN6 386 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 SUCOQ9UBS9 1254 aaKnown RBP5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 BCAP29Q9UHQ4 241 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 MCM8Q9UJA3 840 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 UTS2RQ9UKP6 389 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 GRID1Q9ULK0 1009 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF835Q9Y2P0 537 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 MEMO1Q9Y316 297 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 FIS1Q9Y3D6 152 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 POLR3HQ9Y535 204 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 EXPH5Q8NEV8 1989 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 SPG11Q96JI7 2443 aa5.31□□□□□ -1.56
HMGB1P20-201ENST00000402555 CCDC151A5D8V7 595 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 GOLGA6L10A6NI86 522 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 LRRC3CA6NJW4 275 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 OR6C76A6NM76 312 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 TMEM233B4DJY2 109 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 PRSS44E7EML9 344 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 NPIPA2E9PIF3 369 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 NPIPA3F8WFD2 350 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ACOT7O00154 380 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF500O60304 480 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 GLSO94925 669 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 CBX7O95931 251 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ATP1B1P05026 303 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ANXA4P09525 319 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 NUDT17P0C025 328 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 RFPL3SP0C7P2 107 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 NID1P14543 1247 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 PCSK2P16519 638 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 CSNK2A2P19784 350 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 GPX3P22352 226 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ALDH3A1P30838 453 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 PTGS2P35354 604 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ADH7P40394 386 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 GATA4P43694 442 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 DNAJB13P59910 316 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 TRA2BP62995 288 aaKnown RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 KCNJ2P63252 427 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 C2orf80Q0P641 193 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 IMPG1Q17R60 797 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 SPIN4Q56A73 249 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 EMC4Q5J8M3 183 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 C6orf163Q5TEZ5 329 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 LIPMQ5VYY2 423 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 HLA-DQA1Q5Y7H0 255 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC22A10Q63ZE4 541 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 C20orf204Q6ZNR8 217 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 GK5Q6ZS86 529 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZCCHC23Q6ZST2 131 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 LRRC25Q8N386 305 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 Q8N3U1 123 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 FBXW8Q8N3Y1 598 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 RPRMLQ8N4K4 120 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 MARVELD2Q8N4S9 558 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC15A4Q8N697 577 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 GBP7Q8N8V2 638 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 BANPQ8N9N5 519 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 GOLM1Q8NBJ4 401 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 C7orf57Q8NEG2 295 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 OR52R1Q8NGF1 315 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 OR5M9Q8NGP3 310 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 OR9A2Q8NGT5 310 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 FAM57AQ8TBR7 257 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 RDH11Q8TC12 318 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 PAQR8Q8TEZ7 354 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 DIO2Q92813 273 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ADIPOR1Q96A54 375 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 C11orf24Q96F05 449 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 APOPT1Q96IL0 206 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 SGCZQ96LD1 299 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 JSRP1Q96MG2 331 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF681Q96N22 645 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 SMC6Q96SB8 1091 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ITPAQ9BY32 194 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 IQCGQ9H095 443 aaKnown RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 PPCSQ9HAB8 311 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 IL1RL2Q9HB29 575 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 SH2D2AQ9NP31 389 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 EHD3Q9NZN3 535 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 GIMAP2Q9UG22 337 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 LGALS13Q9UHV8 139 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 CNOT11Q9UKZ1 510 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms