RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 NRG3P56975 720 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 GPR85P60893 370 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 SRSF11Q05519 484 aaKnown RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 EIF2S3LQ2VIR3 472 aaKnown RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 SLC22A10Q63ZE4 541 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 SIAH3Q8IW03 269 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 OR2L13Q8N349 312 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 ZNF75CPQ92670 426 aaPredicted RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 CIDECQ96AQ7 238 aaPredicted RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 HSPBAP1Q96EW2 488 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 LCORQ96JN0 433 aaPredicted RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 PPP1R36Q96LQ0 422 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 VSTM2LQ96N03 204 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 SACM1LQ9NTJ5 587 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 ACSS1Q9NUB1 689 aaPredicted RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 NOP53Q9NZM5 478 aaKnown RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 SH3BP4Q9P0V3 963 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 C19orf53Q9UNZ5 99 aaPredicted RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 EIF3LQ9Y262 564 aaKnown RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 USP9XQ93008 2570 aaPredicted RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 LRRK2Q5S007 2527 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 CAPN14A8MX76 684 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 SCAMP2O15127 329 aaKnown RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 TO15178 435 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 G6PDP11413 515 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 MC3RP41968 323 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 C21orf58P58505 322 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 ALDH6A1Q02252 535 aaKnown RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 ELOAQ14241 798 aaKnown RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 KRTCAP3Q53RY4 240 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 TMEM64Q6YI46 380 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 RIMKLAQ8IXN7 391 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 OR2M7Q8NG81 312 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 OR10G3Q8NGC4 313 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 ELP4Q96EB1 424 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 ZBED6CLQ96FA7 236 aaPredicted RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 BTBD9Q96Q07 612 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 FAM173AQ9BQD7 235 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 TAS2R9Q9NYW1 312 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 CNIH4Q9P003 139 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 FRG2CA6NGY1 282 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 UPK1AO00322 258 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 HDAC3O15379 428 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 PSMG1O95456 288 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 P04436 131 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 CT45A8P0DMV1 189 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 CT45A9P0DMV2 189 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 ZNF24P17028 368 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 DDX5P17844 614 aaKnown RBP17.68■□□□□ 0.42
RTN4-207ENST00000402434 PRPS1L1P21108 318 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 ABCD3P28288 659 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 HPCAL1P37235 193 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 TMED10P49755 219 aaKnown RBP17.68■□□□□ 0.42
RTN4-207ENST00000402434 SRSF1Q07955 248 aaKnown RBP eCLIP17.68■□□□□ 0.424e-8■■□□□ 12.3
RTN4-207ENST00000402434 CT45A2Q5DJT8 189 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 TMEM107Q6UX40 140 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 LARP4Q71RC2 724 aaKnown RBP eCLIP17.68■□□□□ 0.42
RTN4-207ENST00000402434 ZNF551Q7Z340 670 aaPredicted RBP17.68■□□□□ 0.42
RTN4-207ENST00000402434 FAM13CQ8NE31 585 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 OR7A2PQ8NGA2 310 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 COQ8BQ96D53 544 aa17.68■□□□□ 0.42
RTN4-207ENST00000402434 A0A0G2JMM0 328 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 A0A1W2PPB8 328 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 A0A1W2PRS3 328 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 ANKRD33BA6NCL7 494 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 KIR3DP1A8MWS1 328 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 SLCO1B7G3V0H7 640 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 COQ9O75208 318 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 CLDN8P56748 225 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 FOXO1Q12778 655 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 MLC1Q15049 377 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 RPS6KA2Q15349 733 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 OGFOD2Q6N063 350 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 GK5Q6ZS86 529 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 WDR75Q8IWA0 830 aaKnown RBP17.67■□□□□ 0.42
RTN4-207ENST00000402434 FBXW8Q8N3Y1 598 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 KRTCAP2Q8N6L1 136 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 ZFP28Q8NHY6 868 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 PRR7Q8TB68 274 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 GPR137Q96N19 417 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 SECISBP2Q96T21 854 aaKnown RBP17.67■□□□□ 0.42
RTN4-207ENST00000402434 PROK2Q9HC23 129 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 NTMQ9P121 344 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 SEC14L3Q9UDX4 400 aa17.67■□□□□ 0.42
RTN4-207ENST00000402434 PINLYPA6NC86 204 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 NPIPA5E9PKD4 350 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 SDHDO14521 159 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 TP53I11O14683 189 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 ASNA1O43681 348 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 NME6O75414 186 aaPredicted RBP17.66■□□□□ 0.42
RTN4-207ENST00000402434 ERN1O75460 977 aaKnown RBP17.66■□□□□ 0.42
RTN4-207ENST00000402434 UNC5CO95185 931 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 ABCB1P08183 1280 aaPredicted RBP17.66■□□□□ 0.42
RTN4-207ENST00000402434 LAMP1P11279 417 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 LBPP18428 481 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 DIO3P55073 304 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 MANFP55145 182 aaKnown RBP17.66■□□□□ 0.42
RTN4-207ENST00000402434 FBXW4P57775 412 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 PSPHP78330 225 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 NNATQ16517 81 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms