RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 SPATA21Q7Z572 469 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 CMC1Q7Z7K0 106 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 GPR180Q86V85 440 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 CTAGE3PQ8IX95 158 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 LRRC25Q8N386 305 aaPredicted RBP6.09□□□□□ -1.43
VIM2P-201ENST00000402383 SPATA6LQ8N4H0 392 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 TMEM156Q8N614 296 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 CPSF7Q8N684 471 aaKnown RBP6.09□□□□□ -1.43
VIM2P-201ENST00000402383 CELF2-AS1Q8N7Q2 184 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 PPM1NQ8N819 430 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 OR2M7Q8NG81 312 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 LILRB4Q8NHJ6 448 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 HUS1BQ8NHY5 278 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 SLC2A12Q8TD20 617 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 AGAP11Q8TF27 550 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 ASB5Q8WWX0 329 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 ESAMQ96AP7 390 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 NXNL1Q96CM4 212 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 MTFMTQ96DP5 389 aaKnown RBP6.09□□□□□ -1.43
VIM2P-201ENST00000402383 SENP5Q96HI0 755 aaPredicted RBP6.09□□□□□ -1.43
VIM2P-201ENST00000402383 SMC6Q96SB8 1091 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 CSF3RQ99062 836 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 FAM173AQ9BQD7 235 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 CENPKQ9BS16 269 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 SHCBP1LQ9BZQ2 653 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 CXorf56Q9H5V9 222 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 RPF2Q9H7B2 306 aaKnown RBP6.09□□□□□ -1.43
VIM2P-201ENST00000402383 COPS7BQ9H9Q2 264 aaPredicted RBP6.09□□□□□ -1.43
VIM2P-201ENST00000402383 IL1RL2Q9HB29 575 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 ACKR4Q9NPB9 350 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 KLHL1Q9NR64 748 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 SNX15Q9NRS6 342 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 DEPPQ9NTK1 212 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 LYARQ9NX58 379 aaKnown RBP6.09□□□□□ -1.43
VIM2P-201ENST00000402383 CNIH4Q9P003 139 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 TINAGQ9UJW2 476 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 NPIPA1Q9UND3 350 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 CAPN7Q9Y6W3 813 aa6.09□□□□□ -1.43
VIM2P-201ENST00000402383 MED12Q93074 2177 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 PCNX3Q9H6A9 2034 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 A0A096LPK6 155 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 NCF1BA6NI72 391 aaPredicted RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 A8MVJ9 347 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 NCF1CA8MVU1 366 aaPredicted RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 B2RBV5 119 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 PRSS44E7EML9 344 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 AQP7O14520 342 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 BCKDKO14874 412 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 GSC2O15499 205 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 TYROBPO43914 113 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 FGF17O60258 216 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 MGRN1O60291 552 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 CCNT2O60583 730 aaKnown RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 ZNF354AO60765 605 aaPredicted RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 OR6B1O95007 311 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 CLDN9O95484 217 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 CLPSP04118 112 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 VIMP08670 466 aaKnown RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 HSD3B1P14060 373 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 COX7A2P14406 83 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 NCF1P14598 390 aaPredicted RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 ALOX15P16050 662 aaPredicted RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 NAGAP17050 411 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 ELAVL4P26378 380 aaKnown RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 HSD3B2P26439 372 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 GCAP28676 217 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SSTR2P30874 369 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 PTGS2P35354 604 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 BUD31P41223 144 aaPredicted RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SOX3P41225 446 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SLCO1A2P46721 670 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SERPINB8P50452 374 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SLC37A1P57057 533 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 PSPHP78330 225 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 PHEXP78562 749 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 PLIN5Q00G26 463 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 STX4Q12846 297 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SLAMF1Q13291 335 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 GTF2H2Q13888 395 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 FXNQ16595 210 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 NTRK2Q16620 822 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 GTF2H2CQ6P1K8 395 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 KLC3Q6P597 504 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 VHLLQ6RSH7 139 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 RAPH1Q70E73 1250 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 TRILQ7L0X0 811 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SLC22A16Q86VW1 577 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 MCEMP1Q8IX19 187 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 FBXW8Q8N3Y1 598 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SNX31Q8N9S9 440 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 RAB3IL1Q8TBN0 382 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 KCTD4Q8WVF5 259 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 ASB15Q8WXK1 588 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 ERP27Q96DN0 273 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 C11orf24Q96F05 449 aaPredicted RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 RBM18Q96H35 190 aaKnown RBP6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SCYL1Q96KG9 808 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 DHRS1Q96LJ7 313 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 SERPINI1Q99574 410 aa6.08□□□□□ -1.44
VIM2P-201ENST00000402383 MRPL57Q9BQC6 102 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms