RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 SPAG16Q8N0X2 631 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 ZCCHC7Q8N3Z6 543 aaKnown RBP3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 FAM133AQ8N9E0 248 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 OR5T2Q8NGG2 359 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 COG3Q96JB2 828 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 C4orf36Q96KX1 117 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 CCT7Q99832 543 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 NLNQ9BYT8 704 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 FAM124BQ9H5Z6 455 aaPredicted RBP3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 UBE2TQ9NPD8 197 aaPredicted RBP3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 GDAP2Q9NXN4 497 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 THAP10Q9P2Z0 257 aaPredicted RBP3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 P2RX2Q9UBL9 471 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 CTNNA3Q9UI47 895 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 ZNF490Q9ULM2 529 aaPredicted RBP3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 SELENOKQ9Y6D0 94 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 ZMYM6O95789 1325 aa3.6□□□□□ -1.83
SAMSN1-202ENST00000400564 ASB14A6NK59 587 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 SLC1A7O00341 560 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 P2RX6O15547 441 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 MBL2P11226 248 aaPredicted RBP3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 GP9P14770 177 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 TSPAN8P19075 237 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 PAX7P23759 505 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 PTPN4P29074 926 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 OTX2P32243 289 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 UBE2HP62256 183 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 DHODHQ02127 395 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 MEF2DQ14814 521 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 ZMYND11Q15326 602 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 ZNF528Q3MIS6 628 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 ATP1A1-AS1Q5TC04 95 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 ASPHD2Q6ICH7 369 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 ZNF774Q6NX45 483 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 BLOC1S2Q6QNY1 142 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 LRRC70Q7Z2Q7 622 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 CACUL1Q86Y37 369 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 ZNF679Q8IYX0 411 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 EIF1ADQ8N9N8 165 aaKnown RBP3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 RELL2Q8NC24 303 aaPredicted RBP3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 LRRC15Q8TF66 581 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 TCP11Q8WWU5 503 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 CASP10Q92851 521 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 SLC45A3Q96JT2 553 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 FOXN4Q96NZ1 517 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 VPS35Q96QK1 796 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 NDUFAF3Q9BU61 184 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 EDEM2Q9BV94 578 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 RAB11FIP5Q9BXF6 653 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 MRPL13Q9BYD1 178 aaKnown RBP3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 GSDMCQ9BYG8 508 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 CXXC4Q9H2H0 198 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 VCX2Q9H322 139 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 VPS37BQ9H9H4 285 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 MED17Q9NVC6 651 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 MIOXQ9UGB7 285 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 LNPEPQ9UIQ6 1025 aa3.59□□□□□ -1.83
SAMSN1-202ENST00000400564 SF3B1O75533 1304 aaKnown RBP eCLIP3.59□□□□□ -1.845e-6■■■■■ 35.9
SAMSN1-202ENST00000400564 SPATA31D1Q6ZQQ2 1576 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 SHISA7A6NL88 538 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 TCP10L2B9ZVM9 353 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 CCSO14618 274 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 CXCL11O14625 94 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 SH2D1BO14796 132 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 TFECO14948 347 aaPredicted RBP3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 ARPC1BO15143 372 aaKnown RBP3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 SURF4O15260 269 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 NUDT21O43809 227 aaKnown RBP3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 LRCH4O75427 683 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 ANXA9O76027 345 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 IGHV3-13P01766 116 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 CSF2P04141 144 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 IQCF3P0C7M6 154 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 SELEP16581 610 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 GLRA1P23415 457 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 PTPN6P29350 595 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 AXLP30530 894 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 GDI1P31150 447 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 FEN1P39748 380 aaKnown RBP3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 BACE1P56817 501 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 RPS4XP62701 263 aaKnown RBP3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 MFGE8Q08431 387 aaPredicted RBP3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 CD300CQ08708 224 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 MRPL28Q13084 256 aaKnown RBP3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 ANKRD55Q3KP44 614 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 ZNF311Q5JNZ3 666 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 SPATA46Q5T0L3 261 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 DDI2Q5TDH0 399 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 LCLAT1Q6UWP7 414 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 ASRGL1Q7L266 308 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 GOLGA7Q7Z5G4 137 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 LUZP1Q86V48 1076 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 GPBP1Q86WP2 473 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 C17orf64Q86WR6 236 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 FAM131BQ86XD5 332 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 ABHD12Q8N2K0 398 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 STEAP2Q8NFT2 490 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 OR2T3Q8NH03 318 aa3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 WDR36Q8NI36 951 aaKnown RBP3.58□□□□□ -1.84
SAMSN1-202ENST00000400564 PNPT1Q8TCS8 783 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms