RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 CD97P48960 835 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 NKX3-2P78367 333 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 FAM78AQ5JUQ0 283 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 TMEM150AQ86TG1 271 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 PRSS58Q8IYP2 241 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 ANKK1Q8NFD2 765 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 OR2L5Q8NG80 312 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 HCAR2Q8TDS4 363 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 ADAMTS16Q8TE57 1224 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 NXPE3Q969Y0 559 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 RHNO1Q9BSD3 238 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 TM7SF3Q9NS93 570 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 FUCA1P04066 466 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 HIST1H1TP22492 207 aaPredicted RBP17.53■□□□□ 0.4
USP48-204ENST00000400301 LRRC26Q2I0M4 334 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 ZNF791Q3KP31 576 aaPredicted RBP17.53■□□□□ 0.4
USP48-204ENST00000400301 WDR53Q7Z5U6 358 aaPredicted RBP17.53■□□□□ 0.4
USP48-204ENST00000400301 GPR135Q8IZ08 494 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 MMP21Q8N119 569 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 INSM2Q96T92 566 aaPredicted RBP17.53■□□□□ 0.4
USP48-204ENST00000400301 IDUAP35475 653 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 GBX2P52951 348 aaPredicted RBP17.52■□□□□ 0.4
USP48-204ENST00000400301 RPS15AP62244 130 aaKnown RBP17.52■□□□□ 0.4
USP48-204ENST00000400301 FIGNL1Q6PIW4 674 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 GDPGP1Q6ZNW5 385 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 SLC46A3Q7Z3Q1 461 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 KLBQ86Z14 1044 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 ACSS1Q9NUB1 689 aaPredicted RBP17.52■□□□□ 0.4
USP48-204ENST00000400301 ANKMY1Q9P2S6 941 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 OR6C70A6NIJ9 312 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 OLFM2O95897 454 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 TNFP01375 233 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 NKX2-5P52952 324 aaPredicted RBP17.52■□□□□ 0.4
USP48-204ENST00000400301 RELTQ969Z4 430 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 CENPOQ9BU64 300 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 ACTRT3Q9BYD9 372 aa17.52■□□□□ 0.4
USP48-204ENST00000400301 TMEFF2Q9UIK5 374 aaPredicted RBP17.52■□□□□ 0.4
USP48-204ENST00000400301 DNMT3AQ9Y6K1 912 aaPredicted RBP17.52■□□□□ 0.4
USP48-204ENST00000400301 OR2A25A4D2G3 310 aa17.52■□□□□ 0.39
USP48-204ENST00000400301 PROM1O43490 865 aa17.52■□□□□ 0.39
USP48-204ENST00000400301 GNSP15586 552 aa17.52■□□□□ 0.39
USP48-204ENST00000400301 IRS1P35568 1242 aa17.52■□□□□ 0.39
USP48-204ENST00000400301 GIPRP48546 466 aa17.52■□□□□ 0.39
USP48-204ENST00000400301 POU6F2P78424 691 aaPredicted RBP17.52■□□□□ 0.39
USP48-204ENST00000400301 IRF4Q15306 451 aa17.52■□□□□ 0.39
USP48-204ENST00000400301 TM4SF18Q96CE8 201 aa17.52■□□□□ 0.39
USP48-204ENST00000400301 OR5M11Q96RB7 305 aa17.52■□□□□ 0.39
USP48-204ENST00000400301 ZNF639Q9UID6 485 aa17.52■□□□□ 0.39
USP48-204ENST00000400301 ZFR2Q9UPR6 939 aaKnown RBP17.52■□□□□ 0.39
USP48-204ENST00000400301 PLPP1O14494 284 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 WNT4P56705 351 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 VSX2P58304 361 aaPredicted RBP17.51■□□□□ 0.39
USP48-204ENST00000400301 DESI1Q6ICB0 168 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 RTL10Q7L3V2 364 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 SPPL3Q8TCT6 385 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 CCDC32Q9BV29 185 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 GABARAPL1Q9H0R8 117 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 SATB2Q9UPW6 733 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 TMEM5Q9Y2B1 443 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 CORINQ9Y5Q5 1042 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 COQ9O75208 318 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 PRPH2P23942 346 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 NTSR1P30989 418 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 AQP6Q13520 282 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 TBRG1Q3YBR2 411 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 FLYWCH1Q4VC44 716 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 TECPR1Q7Z6L1 1165 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 ACBD7Q8N6N7 88 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 NEURL3Q96EH8 262 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 PRRC1Q96M27 445 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 GSDMCQ9BYG8 508 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 IGLV3-16A0A075B6K0 115 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 A0A1W2PQL4 384 aaPredicted RBP17.51■□□□□ 0.39
USP48-204ENST00000400301 CD8B2A6NJW9 211 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 MT-ND5P03915 603 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 CD8BP10966 210 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 GUCA1AP43080 201 aaPredicted RBP17.51■□□□□ 0.39
USP48-204ENST00000400301 GID4Q8IVV7 300 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 POMGNT2Q8NAT1 580 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 PLA2G15Q8NCC3 412 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 ZDHHC5Q9C0B5 715 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 DZANK1Q9NVP4 752 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 MRTO4Q9UKD2 239 aaKnown RBP17.51■□□□□ 0.39
USP48-204ENST00000400301 ARHGAP33O14559 1287 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 JUNDP17535 347 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 CD22P20273 847 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 BLKP51451 505 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 HYAL2Q12891 473 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 ADAM15Q13444 863 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 C6orf132Q5T0Z8 1188 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 OLIG3Q7RTU3 272 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 PARP16Q8N5Y8 322 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 THSD1Q9NS62 852 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 CLDND1Q9NY35 253 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 CARD8Q9Y2G2 431 aa17.51■□□□□ 0.39
USP48-204ENST00000400301 TMA7Q9Y2S6 64 aaKnown RBP17.51■□□□□ 0.39
USP48-204ENST00000400301 PLXNA1Q9UIW2 1896 aa17.5■□□□□ 0.39
USP48-204ENST00000400301 CTSLP07711 333 aa17.5■□□□□ 0.39
USP48-204ENST00000400301 F8A1P23610 371 aa17.5■□□□□ 0.39
USP48-204ENST00000400301 ENPP2Q13822 863 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms