RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 COG8Q96MW5 612 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF347Q96SE7 839 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 CDC6Q99741 560 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 RNF32Q9H0A6 362 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 TAS2R7Q9NYW3 318 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 HAX1O00165 279 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 KLK10O43240 276 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 HMGN1P05114 100 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 S1PR1P21453 382 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 VASPP50552 380 aaPredicted RBP10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 MPPED2Q15777 294 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 LARP4Q71RC2 724 aaKnown RBP eCLIP10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 HCFC1R1Q9NWW0 138 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 ZDHHC7Q9NXF8 308 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 FAM149AA5PLN7 773 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 NPHS1O60500 1241 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 PSMA1P25786 263 aaKnown RBP10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 HNF4GQ14541 408 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 PTGR1Q14914 329 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 ARL13AQ5H913 290 aaPredicted RBP10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 IL20RBQ6UXL0 311 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 BIRC8Q96P09 236 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 GPR62Q9BZJ7 368 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 POLR2J3Q9H1A7 115 aaKnown RBP10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 MRPS2Q9Y399 296 aaKnown RBP10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 MYADML2A6NDP7 307 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 OPN1SWP03999 348 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 KCNC1P48547 511 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 SLC35F1Q5T1Q4 408 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 REP15Q6BDI9 236 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 LRFN4Q6PJG9 635 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 ZNF765Q7L2R6 523 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 CHFRQ96EP1 664 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 ZNF641Q96N77 438 aaPredicted RBP10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 KCNC2Q96PR1 638 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 DPH7Q9BTV6 452 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 CWH43Q9H720 699 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 PLEKHM1Q9Y4G2 1056 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 PCDHGA5Q9Y5G8 931 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 SCRG1O75711 98 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 NR4A2P43354 598 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 SLC10A1Q14973 349 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 NPTX1Q15818 432 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 PPM1JQ5JR12 505 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 SYPL2Q5VXT5 272 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 FAM205BPQ63HN1 556 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 AGTRAPQ6RW13 159 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 ADAMTS18Q8TE60 1221 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 LRCH3Q96II8 777 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 METTL2AQ96IZ6 378 aaKnown RBP10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 NTPCRQ9BSD7 190 aaKnown RBP10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 MAF1Q9H063 256 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 CD320Q9NPF0 282 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 ATP23Q9Y6H3 246 aa10.46□□□□□ -0.74
CACNA1C-216ENST00000399638 TRAV6A0A075B6T7 132 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 SLC34A2O95436 690 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 TXNDC12O95881 172 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 PTHP01270 115 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 NDUFV2P19404 249 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 SLC9A3P48764 834 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 AFF3P51826 1226 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 ERV3-1Q14264 604 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 SEC23BQ15437 767 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 Q1RN00 199 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 CIB1Q99828 191 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 RBM4BQ9BQ04 359 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 RBM4Q9BWF3 364 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 ACTRT3Q9BYD9 372 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 UBE2ZQ9H832 354 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 EPHA6Q9UF33 1036 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 ST14Q9Y5Y6 855 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 CAPN5O15484 640 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 BMP1P13497 986 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 RPL7P18124 248 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 IL1RNP18510 177 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 CDKN2BP42772 138 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 ST3GAL3Q11203 375 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 GRB7Q14451 532 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 TMEM107Q6UX40 140 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 NLRC3Q7RTR2 1065 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 GALNT12Q8IXK2 581 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 NUP43Q8NFH3 380 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 MDGA1Q8NFP4 955 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 ZNF420Q8TAQ5 688 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 SPTSSAQ969W0 71 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 TMEM45AQ9NWC5 275 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 MKS1Q9NXB0 559 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 NDRG3Q9UGV2 375 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 N4BP2Q86UW6 1770 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 CXCR6O00574 342 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 YKT6O15498 198 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 AP1G1O43747 822 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 SNAI1O95863 264 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 EDNRBP24530 442 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 MC3RP41968 323 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 PIK3CBP42338 1070 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 NPBWR1P48145 328 aa10.45□□□□□ -0.74
CACNA1C-216ENST00000399638 LIMK2P53671 638 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms