RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PRR5P85299 388 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 HSPB3Q12988 150 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 ZNF169Q14929 603 aaPredicted RBP16.34■□□□□ 0.21
CTNS-203ENST00000399306 EXOSC7Q15024 291 aaKnown RBP16.34■□□□□ 0.21
CTNS-203ENST00000399306 PGS1Q32NB8 556 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 BHLHB9Q6PI77 547 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 TMEM107Q6UX40 140 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 GOLM1Q8NBJ4 401 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 THAP3Q8WTV1 239 aaPredicted RBP16.34■□□□□ 0.21
CTNS-203ENST00000399306 ASB15Q8WXK1 588 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 CHMP6Q96FZ7 201 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 LCORQ96JN0 433 aaPredicted RBP16.34■□□□□ 0.21
CTNS-203ENST00000399306 TEX37Q96LM6 180 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 SIRT3Q9NTG7 399 aaPredicted RBP16.34■□□□□ 0.21
CTNS-203ENST00000399306 LRFN1Q9P244 771 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 KLHL14Q9P2G3 628 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 PCDHGB4Q9UN71 923 aa16.34■□□□□ 0.21
CTNS-203ENST00000399306 GPR55Q9Y2T6 319 aaPredicted RBP16.34■□□□□ 0.21
CTNS-203ENST00000399306 FAM234BA2RU67 622 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 FRG2CA6NGY1 282 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 A8MVJ9 347 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 WWP2O00308 870 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 NEURL1O76050 574 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 SORBS2O94875 1100 aaKnown RBP16.33■□□□□ 0.2
CTNS-203ENST00000399306 PGRP06401 933 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 FBXO45P0C2W1 286 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 CD46P15529 392 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 IL12AP29459 219 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 NFATC3Q12968 1075 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 SQLEQ14534 574 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 OR1C1Q15619 314 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 FAM174BQ3ZCQ3 159 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 SPANXN4Q5MJ08 99 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 OR4F3Q6IEY1 312 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 TMEM178AQ8NBL3 297 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 GOT1L1Q8NHS2 421 aaPredicted RBP16.33■□□□□ 0.2
CTNS-203ENST00000399306 RFWD2Q8NHY2 731 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 DOK4Q8TEW6 326 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 TMEM125Q96AQ2 219 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 SCMH1Q96GD3 660 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 GAL3ST4Q96RP7 486 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 SECISBP2Q96T21 854 aaKnown RBP16.33■□□□□ 0.2
CTNS-203ENST00000399306 ITPAQ9BY32 194 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.33■□□□□ 0.2
CTNS-203ENST00000399306 FOLH1BQ9HBA9 442 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 HPF1Q9NWY4 346 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 GIN1Q9NXP7 522 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 PLA2G3Q9NZ20 509 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 DCTN4Q9UJW0 460 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 CFAP46Q8IYW2 2715 aa16.33■□□□□ 0.2
CTNS-203ENST00000399306 A0A0G2JND7 137 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 B8ZZF3 427 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 ERN1O75460 977 aaKnown RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 MAP3K8P41279 467 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 CDK9P50750 372 aaKnown RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 NR0B1P51843 470 aaKnown RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 ARFIP2P53365 341 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 PHC1P78364 1004 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 OC90Q02509 493 aaPredicted RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 ZNHIT3Q15649 155 aaPredicted RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 NTRK2Q16620 822 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 ZNF791Q3KP31 576 aaPredicted RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 PLEKHN1Q494U1 663 aaPredicted RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 VPS26BQ4G0F5 336 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 CGB2Q6NT52 195 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 LYPD8Q6UX82 237 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 RTL4Q6ZR62 310 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 CYP4Z2PQ8N1L4 340 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 ZNF843Q8N446 348 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 CDRT4Q8N9R6 151 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 NUP43Q8NFH3 380 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 OR56A1Q8NGH5 318 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 SPACA9Q96E40 222 aaPredicted RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 RILPQ96NA2 401 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 CCDC115Q96NT0 180 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 MS4A4EQ96PG1 132 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 LMF2Q9BU23 707 aaKnown RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 NXF5Q9H1B4 397 aaKnown RBP16.32■□□□□ 0.2
CTNS-203ENST00000399306 ZNF385DQ9H6B1 395 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 PCDHGA10Q9Y5H3 936 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 NPFFR2Q9Y5X5 522 aa16.32■□□□□ 0.2
CTNS-203ENST00000399306 EXPH5Q8NEV8 1989 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 SUV39H1O43463 412 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 ABCB7O75027 752 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 C6orf47O95873 294 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 SP1P08047 785 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 KRT16P08779 473 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 CT45A8P0DMV1 189 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 CT45A9P0DMV2 189 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 LSP1P33241 339 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 PTGER1P34995 402 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 SOX3P41225 446 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 ZFP36L2P47974 494 aaKnown RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 CCT3P49368 545 aaKnown RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 PRIM2P49643 509 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 POLR2JP52435 117 aaKnown RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 HBA1P69905 142 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 NADK2Q4G0N4 442 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 CYP27C1Q4G0S4 372 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 CT45A2Q5DJT8 189 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms