RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 CATSPER2Q96P56 530 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 BBS4Q96RK4 519 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ELAC2Q9BQ52 826 aaKnown RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 HOXD1Q9GZZ0 328 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 SRMSQ9H3Y6 488 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 NEK6Q9HC98 313 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 GID8Q9NWU2 228 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 LRIT1Q9P2V4 623 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 MALT1Q9UDY8 824 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ZNF223Q9UK11 482 aaPredicted RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 SLC22A14Q9Y267 594 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 GPR55Q9Y2T6 319 aaPredicted RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 CBY1Q9Y3M2 126 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 TCP11X1B4DZS4 312 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 C9orf172C9J069 976 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 H0YGG7 62 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 SSX5O60225 188 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 TMPRSS11DO60235 418 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 CNOT3O75175 753 aaKnown RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 GPR75O95800 540 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ACP5P13686 325 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ALOX12P18054 663 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 SLC6A2P23975 617 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 PSMA4P25789 261 aaKnown RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ADH6P28332 368 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 PTGDSP41222 190 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ARF3P61204 181 aaPredicted RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 NCALDP61601 193 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 TUBA4AP68366 448 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 CCL7P80098 99 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 RUNX2Q13950 521 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 PFKFB4Q16877 469 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ZNF770Q6IQ21 691 aaPredicted RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 Q6ZPB1 254 aaPredicted RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ZNF551Q7Z340 670 aaPredicted RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 LINC00471Q8N535 108 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 CCDC74BQ96LY2 380 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 SIGLEC11Q96RL6 698 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 SAV1Q9H4B6 383 aaPredicted RBP3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ACTR3BQ9P1U1 418 aa3.42□□□□□ -1.86
FNDC3A-202ENST00000398316 ACACAQ13085 2346 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 AGRPO00253 132 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 CCL22O00626 93 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 LIPCP11150 499 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 COX6A1P12074 109 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 ST6GAL1P15907 406 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 PBLDP30039 288 aaPredicted RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 EVI2BP34910 448 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 RBM34P42696 430 aaKnown RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 HSPA7P48741 367 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 SLC37A1P57057 533 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 EEF1A1P68104 462 aaKnown RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 RGS1Q08116 209 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 SLBPQ14493 270 aaKnown RBP eCLIP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 HEPACAMQ14CZ8 416 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 NTRK2Q16620 822 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 ZNF630Q2M218 657 aaPredicted RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 KRTAP27-1Q3LI81 207 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 MINDY4Q4G0A6 757 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 VWA2Q5GFL6 755 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 ETFRF1Q6IPR1 90 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 MTFR2Q6P444 385 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 ACAD11Q709F0 780 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 RETREG3Q86VR2 466 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 LIX1Q8N485 282 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 ESX1Q8N693 406 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 ATG16L2Q8NAA4 619 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 MINDY2Q8NBR6 621 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 RIT1Q92963 219 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 PPP1R14AQ96A00 147 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 OR52B2Q96RD2 323 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 NDC1Q9BTX1 674 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 PIGUQ9H490 435 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 SERHL2Q9H4I8 314 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 POLE4Q9NR33 117 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 HEY2Q9UBP5 337 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 PCDHGB4Q9UN71 923 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 MRPS7Q9Y2R9 242 aaKnown RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 XIRP2A4UGR9 3374 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 A0A1W2PR48 441 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 OR2AG2A6NM03 316 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 POLR1CO15160 346 aaPredicted RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 SMAD9O15198 467 aaKnown RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 KLK10O43240 276 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 FADS1O60427 444 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 ABCB7O75027 752 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 NPIPB7O75200 414 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 TRIM3O75382 744 aaPredicted RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 SLC22A3O75751 556 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 OR4F21O95013 312 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 PAHP00439 452 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 HEXBP07686 556 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 CDH1P12830 882 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 HPGDP15428 266 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 CSNK2A2P19784 350 aaPredicted RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 PIK3R1P27986 724 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 TLX1P31314 330 aaPredicted RBP3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 PPICP45877 212 aa3.41□□□□□ -1.86
FNDC3A-202ENST00000398316 HTR6P50406 440 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms