RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 RRNAD1Q96FB5 475 aaKnown RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TMEM169Q96HH4 297 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ZFP42Q96MM3 310 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NPAS1Q99742 590 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ADAM2Q99965 735 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TBL1YQ9BQ87 522 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TRMOQ9BU70 441 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ACTL8Q9H568 366 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF385DQ9H6B1 395 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CPNE5Q9HCH3 593 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 PGPEP1Q9NXJ5 209 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CCDC167Q9P0B6 97 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CHRNA9Q9UGM1 479 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CDH7Q9ULB5 785 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TLR6Q9Y2C9 796 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 AUP1Q9Y679 476 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 VPS13AQ96RL7 3174 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CBY3A6NI87 242 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SERPINE3A8MV23 424 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SDHDO14521 159 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 GSTA4O15217 222 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NRP2O60462 931 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 STX11O75558 287 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 FCGR1AP12314 374 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 PPP3CBP16298 524 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 EPORP19235 508 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 GTF2E2P29084 291 aaKnown RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CHRNA4P43681 627 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CDKL1Q00532 357 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TNFRSF9Q07011 255 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SCAPQ12770 1279 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 BTN1A1Q13410 526 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CAMK1Q14012 370 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 KIF19Q2TAC6 998 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF19Q5SWL8 479 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 REP15Q6BDI9 236 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 WBP2NLQ6ICG8 309 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 MAMDC4Q6UXC1 1216 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 KANSL1Q7Z3B3 1105 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 OR7G3Q8NG95 312 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 STT3BQ8TCJ2 826 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NXNL1Q96CM4 212 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 KLHL32Q96NJ5 620 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TAAR6Q96RI8 345 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM49AQ9H0Q0 323 aaPredicted RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 WDCPQ9H6R7 721 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 MMP25Q9NPA2 562 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 POFUT2Q9Y2G5 429 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CEPT1Q9Y6K0 416 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM230AA0A1W2PPH8 454 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 BBIP1A8MTZ0 92 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 H3BNH8 94 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 SMLR1H3BR10 107 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 H7C2Y5 167 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 HRKO00198 91 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 RGS9O75916 674 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 MOCS2O96007 188 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 INHBBP09529 407 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 LMO2P25791 158 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PSMD8P48556 350 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 RBP2P50120 134 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 MAP2K6P52564 334 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PRSS12P56730 875 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 DNASE1L3Q13609 305 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ARL6IP1Q15041 203 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ACOX1Q15067 660 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 LRRC66Q68CR7 880 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FRMPD2BQ6IN97 320 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 TMEM71Q6P5X7 295 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM151BQ6UXP7 276 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 CYP2R1Q6VVX0 501 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 LGI2Q8N0V4 545 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ZFP82Q8N141 532 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PPTC7Q8NI37 304 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 SELENOMQ8WWX9 145 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 GTF2H4Q92759 462 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 C5orf30Q96GV9 206 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 C1QTNF1Q9BXJ1 281 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 DUSP15Q9H1R2 295 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PIGVQ9NUD9 493 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 CACNA2D2Q9NY47 1150 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 EPHA6Q9UF33 1036 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 OPN4Q9UHM6 478 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 WASF3Q9UPY6 502 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PLEKHA6Q9Y2H5 1048 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 U3KQV3 271 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 CCL15-CCL14A0A0B4J2E2 113 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 TEX13DA0A0J9YY54 714 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PLSCR5A0PG75 271 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 E7ENX8 843 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 RGS10O43665 173 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 UGT1A1P22309 533 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 UGT1A4P22310 534 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 UGT1A3P35503 534 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 UGT1A5P35504 534 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FASLGP48023 281 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 KIAA1024LP59773 190 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PPP2CBP62714 309 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 HERVK_113P63132 956 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PPP2CAP67775 309 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms