RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 HEMK1Q9Y5R4 338 aaPredicted RBP21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 K7ENP7 123 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 UBOX5O94941 541 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 PSMG1O95456 288 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 ITGAMP11215 1152 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 NUDT2P50583 147 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 AP2B1P63010 937 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 VAC14Q08AM6 782 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 ZNF155Q12901 538 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 CHAF1BQ13112 559 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 ART3Q13508 389 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 SAXO2Q658L1 398 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 INO80CQ6PI98 192 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 ANGPTL8Q6UXH0 198 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 MSRB3Q8IXL7 192 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 C9orf40Q8IXQ3 194 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 ZFP90Q8TF47 636 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 GIMAP5Q96F15 307 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 THOC3Q96J01 351 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 DEFB126Q9BYW3 111 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 FOLH1BQ9HBA9 442 aa21.91■■□□□ 1.1
TSPAN4-203ENST00000397397 ZFAND5O76080 213 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 KRT75O95678 551 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 RNF4P78317 190 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 GABPB1Q06547 395 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 CAPRIN1Q14444 709 aaKnown RBP21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 C6orf89Q6UWU4 347 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 LRRC58Q96CX6 371 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 NEURL3Q96EH8 262 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 AURKBQ96GD4 344 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 SLC35G5Q96KT7 338 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 GAL3ST4Q96RP7 486 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 CGREF1Q99674 301 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 ING2Q9H160 280 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 EPS8L2Q9H6S3 715 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 TPT1P8Q9HAU6 139 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 DTX4Q9Y2E6 619 aa21.9■■□□□ 1.1
TSPAN4-203ENST00000397397 TRBV5-3A0A0A0MS03 114 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 PRKNO60260 465 aaPredicted RBP21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 NPPAP01160 153 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 C1QCP02747 245 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 HMGN2P05204 90 aaKnown RBP21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 ITGA3P26006 1051 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 PRIM2P49643 509 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 LASP1Q14847 261 aaKnown RBP21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 MYBPC3Q14896 1274 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 EBPQ15125 230 aaKnown RBP21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 HLA-DQA1Q5Y7H0 255 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 MFSD12Q6NUT3 480 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 OR8K3Q8NH51 312 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 PNPT1Q8TCS8 783 aaKnown RBP21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 ROPN1LQ96C74 230 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 C16orf58Q96GQ5 468 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 YIPF4Q9BSR8 244 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 ITPAQ9BY32 194 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 WWTR1Q9GZV5 400 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 GPATCH2Q9NW75 528 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 FAF1Q9UNN5 650 aaPredicted RBP21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 ZFHX4Q86UP3 3567 aa21.89■■□□□ 1.1
TSPAN4-203ENST00000397397 C2orf92A0A1B0GVN3 265 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 CLIC1O00299 241 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 T-ENOLP0DO92 83 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 CALB2P22676 271 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 MNAT1P51948 309 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 CASP9P55211 416 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 MXRA7P84157 204 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 RUNDC3AQ59EK9 446 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 JMJD6Q6NYC1 403 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 WDR53Q7Z5U6 358 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 OR5L2Q8NGL0 311 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 FBXO30Q8TB52 745 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 THAP3Q8WTV1 239 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 JADE3Q92613 823 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 CRELD1Q96HD1 420 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 VSTM2LQ96N03 204 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 ANKRD27Q96NW4 1050 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 SLC39A3Q9BRY0 314 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 LHPPQ9H008 270 aa21.89■■□□□ 1.09
TSPAN4-203ENST00000397397 A8MUI8 341 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 FXYD1O00168 92 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 UNC5CO95185 931 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 MATN1P21941 496 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 RPS26P62854 115 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 ZNHIT3Q15649 155 aaPredicted RBP21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 COL28A1Q2UY09 1125 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 IRAK1BP1Q5VVH5 260 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 ZCCHC12Q6PEW1 402 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 HACD2Q6Y1H2 254 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 RNF130Q86XS8 419 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 GALNT16Q8N428 558 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 CDRT4Q8N9R6 151 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 BRIX1Q8TDN6 353 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 SLC9A6Q92581 669 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 CPPED1Q9BRF8 314 aaPredicted RBP21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 ACTRT3Q9BYD9 372 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 LIN28AQ9H9Z2 209 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 KCNMB2Q9Y691 235 aa21.88■■□□□ 1.09
TSPAN4-203ENST00000397397 A6NL46 340 aa21.87■■□□□ 1.09
TSPAN4-203ENST00000397397 KRT16P08779 473 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms