RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 PUM1Q14671 1186 aaKnown RBP eCLIP5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 STARD3Q14849 445 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 EXOC3L2Q2M3D2 409 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 MINDY4Q4G0A6 757 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 COX20Q5RI15 118 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 EGFLAMQ63HQ2 1017 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZNF554Q86TJ5 538 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 ATCAYQ86WG3 371 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 HORMAD2Q8N7B1 307 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 NANOGP1Q8N7R0 232 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZNF485Q8NCK3 441 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 OR52N1Q8NH53 320 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 RPS4Y2Q8TD47 263 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 EFHD2Q96C19 240 aaPredicted RBP5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 ALPK1Q96QP1 1244 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 TRMT61BQ9BVS5 477 aaKnown RBP5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 ACAT2Q9BWD1 397 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZNF350Q9GZX5 532 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 MIR1-1HGQ9H1L0 117 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 EXOSC4Q9NPD3 245 aaKnown RBP5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 ASB6Q9NWX5 421 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 TMCC3Q9ULS5 477 aa5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 C19orf53Q9UNZ5 99 aaPredicted RBP5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 FAM32AQ9Y421 112 aaKnown RBP5.66□□□□□ -1.5
RAPGEF4-203ENST00000397087 LOC100506127A0A0U1RQW1 187 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 A0A1W2PQF6 199 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 KIAA0513O60268 411 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 FAM20BO75063 409 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 B3GALT4O96024 378 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 KLK1P06870 262 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 CSNK2A2P19784 350 aaPredicted RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 SHC2P98077 582 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 HYAL1Q12794 435 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 MRPL28Q13084 256 aaKnown RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 SUZ12Q15022 739 aaKnown RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZNF628Q5EBL2 1059 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 TANGO2Q6ICL3 276 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 ABHD13Q7L211 337 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 CAMKVQ8NCB2 501 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 UTP15Q8TED0 518 aaKnown RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 DIO2Q92813 273 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZNF426Q9BUY5 554 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 SLC19A3Q9BZV2 496 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 GLIPR2Q9H4G4 154 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 SERHL2Q9H4I8 314 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 MTHFD2LQ9H903 347 aaPredicted RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 POLMQ9NP87 494 aaPredicted RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 EXOSC3Q9NQT5 275 aaKnown RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 CRNNQ9UBG3 495 aaPredicted RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 SLC23A2Q9UGH3 650 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 TP53BP1Q12888 1972 aaPredicted RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 M0R082 166 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 IMPA2O14732 288 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 FFAR1O14842 300 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 TSPAN19P0C672 248 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 ETFAP13804 333 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 POU2F1P14859 743 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 HNRNPA2B1P22626 353 aaKnown RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 BCL6P41182 706 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 IDH2P48735 452 aaKnown RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 CCT3P49368 545 aaKnown RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 C21orf59P57076 290 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 AQP6Q13520 282 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 TPBGQ13641 420 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 GGTLC2Q14390 218 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 TRAM2Q15035 370 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 TCTN3Q6NUS6 607 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZNF613Q6PF04 617 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 DCDC5Q6ZRR9 648 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 ADCK1Q86TW2 530 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZNF440Q8IYI8 595 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 SLC5A8Q8N695 610 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 OR52E1Q8NGJ3 308 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 OR6S1Q8NH40 331 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 KLHL6Q8WZ60 621 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 PHYHIPQ92561 330 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 OTULINQ96BN8 352 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 TMEM80Q96HE8 168 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 TMEM19Q96HH6 336 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 CD180Q99467 661 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 NMNAT1Q9HAN9 279 aaPredicted RBP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 SLAMF7Q9NQ25 335 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 RAPGEFL1Q9UHV5 662 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 POLHQ9Y253 713 aa5.65□□□□□ -1.5
RAPGEF4-203ENST00000397087 PRAMEF33A0A0G2JMD5 474 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 SAP18O00422 153 aaKnown RBP5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 XPNPEP2O43895 674 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 PRAMEF10O60809 474 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 LYPD3O95274 346 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 MT-ND2P03891 347 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 NGFRP08138 427 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 FMO3P31513 532 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 SMSP52788 366 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 EEF1A1P68104 462 aaKnown RBP5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 NTHL1P78549 312 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 SPIBQ01892 262 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 FUT5Q11128 374 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 MAP4K2Q12851 820 aa5.65□□□□□ -1.51
RAPGEF4-203ENST00000397087 DCST1Q5T197 706 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms