RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SLC6A1P30531 599 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 ZNF33BQ06732 778 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 IKZF1Q13422 519 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 PIN1Q13526 163 aaPredicted RBP22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 OR11H7Q8NGC8 314 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 OR4D11Q8NGI4 311 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 CYB5D2Q8WUJ1 264 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 NT5DC2Q9H857 520 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 NEDD8-MDP1E9PL57 170 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 SLC16A5O15375 505 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 SLCO2B1O94956 709 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 FGF9P31371 208 aaPredicted RBP22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 GABRA5P31644 462 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 RIN1Q13671 783 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 GRK1Q15835 563 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 GAREM2Q75VX8 874 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 OR6C4Q8NGE1 309 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 ZNF582Q96NG8 517 aaPredicted RBP22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 SORCS2Q96PQ0 1159 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 MVB12BQ9H7P6 319 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 CCL26Q9Y258 94 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 GPR52Q9Y2T5 361 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 A0A1W2PRU2 124 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 BET1O15155 118 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 GPR37L1O60883 481 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 ALDH1A1P00352 501 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 ARAFP10398 606 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 RPA4Q13156 261 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 ADAM15Q13444 863 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 KCNC3Q14003 757 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 KLHL12Q53G59 568 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 GPR139Q6DWJ6 353 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 TMEM220Q6QAJ8 160 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 GPR32P1Q8NGA4 272 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 ZSCAN32Q9NX65 697 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 PIPSLA2A3N6 862 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 PAHP00439 452 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 SOD1P00441 154 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 PTNP21246 168 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 CSTF1Q05048 431 aaKnown RBP22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 DBPQ10586 325 aaPredicted RBP22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 COL28A1Q2UY09 1125 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 PGBD2Q6P3X8 592 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 SLC38A5Q8WUX1 472 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 TMEM19Q96HH6 336 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 SLAMF7Q9NQ25 335 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 SEMA3GQ9NS98 782 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 KLHL42Q9P2K6 505 aa22.66■■□□□ 1.22
CSNK1E-203ENST00000396832 M0R3H8 397 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 KLHL18O94889 574 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 ATP12AP54707 1039 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 C3orf38Q5JPI3 329 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 DMRT3Q9NQL9 472 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 TAAR2Q9P1P5 351 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 VCANP13611 3396 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 A0A0G2JN53 185 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 RPS10-NUDT3A0A1W2PQS6 291 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 ATP6V1G2-DDX39BF2Z307 99 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 NPC1O15118 1278 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 ABLIM3O94929 683 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 NTN1O95631 604 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 STOMP27105 288 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 EXOSC2Q13868 293 aaKnown RBP22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 MZT2AQ6P582 158 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 CFAP206Q8IYR0 622 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 IGSF21Q96ID5 467 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 METTL2AQ96IZ6 378 aaKnown RBP22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 KCNN2Q9H2S1 579 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 ATP6V1HQ9UI12 483 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 INSL5Q9Y5Q6 135 aa22.65■■□□□ 1.22
CSNK1E-203ENST00000396832 TRAV6A0A075B6T7 132 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 SHISA3A0PJX4 238 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 LANCL1O43813 399 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 LEFTY1O75610 366 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 CD79BP40259 229 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 SPDYE7PQ495Y7 208 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 PLA1AQ53H76 456 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 TCTN3Q6NUS6 607 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 TMEM25Q86YD3 366 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 POLDIP3Q9BY77 421 aaKnown RBP22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 IL21Q9HBE4 155 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 EMC7Q9NPA0 242 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 SLCO1C1Q9NYB5 712 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 RWDD3Q9Y3V2 267 aa22.64■■□□□ 1.22
CSNK1E-203ENST00000396832 CST5P28325 142 aaPredicted RBP22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 NNMTP40261 264 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 EPHB3P54753 998 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 INSL4Q14641 139 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 PRSS42Q7Z5A4 293 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 COMTD1Q86VU5 262 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 GPALPP1Q8IXQ4 340 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 FIBINQ8TAL6 211 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 TMED9Q9BVK6 235 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 PRR14Q9BWN1 585 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 GULP1Q9UBP9 304 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 PRKAB1Q9Y478 270 aa22.64■■□□□ 1.21
CSNK1E-203ENST00000396832 FAAHO00519 579 aa22.63■■□□□ 1.21
CSNK1E-203ENST00000396832 TP53P04637 393 aaPredicted RBP22.63■■□□□ 1.21
CSNK1E-203ENST00000396832 NPPBP16860 134 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms