RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 KLHL21Q9UJP4 597 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 NCKAP1Q9Y2A7 1128 aa13.52□□□□□ -0.25
CLIP2-203ENST00000395060 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-203ENST00000395060 H7C4K7 107 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 NUPL2O15504 423 aaKnown RBP13.51□□□□□ -0.25
CLIP2-203ENST00000395060 SOCS5O75159 536 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 CCT3P49368 545 aaKnown RBP13.51□□□□□ -0.25
CLIP2-203ENST00000395060 ZNF81P51508 661 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 OR10A3P58181 314 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 ZNF750Q32MQ0 723 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 SMARCD3Q6STE5 483 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 ESPNLQ6ZVH7 1005 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 SYT9Q86SS6 491 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 BPHLQ86WA6 291 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-203ENST00000395060 FAM46AQ96IP4 442 aaKnown RBP13.51□□□□□ -0.25
CLIP2-203ENST00000395060 FCRL4Q96PJ5 515 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 ARPC5LQ9BPX5 153 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 TREX2Q9BQ50 279 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-203ENST00000395060 TMEM43Q9BTV4 400 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 FZD3Q9NPG1 666 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 TDP1Q9NUW8 608 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 PLXND1Q9Y4D7 1925 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 DSPPQ9NZW4 1301 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 A0A0B4J203 849 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 CPSF4LA6NMK7 179 aaKnown RBP13.51□□□□□ -0.25
CLIP2-203ENST00000395060 AGAP14A8MT82 685 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 MPC1LP0DKB6 136 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 DRD5P21918 477 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 DCDC1P59894 354 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 C22orf39Q6P5X5 142 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 CBARPQ8N350 705 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-203ENST00000395060 C9orf62Q8N4C0 152 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 SAMD12Q8N8I0 201 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 PMEPA1Q969W9 287 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 CAPNS2Q96L46 248 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 FOPNLQ96NB1 174 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 CHIAQ9BZP6 476 aa13.51□□□□□ -0.25
CLIP2-203ENST00000395060 DIMT1Q9UNQ2 313 aaKnown RBP13.51□□□□□ -0.25
CLIP2-203ENST00000395060 GABRPO00591 440 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 CD3GP09693 182 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 LIMS3P0CW19 117 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 LIMS4P0CW20 117 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 C8orf89P0DMQ9 161 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 EVX1P49640 407 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 VSX2P58304 361 aaPredicted RBP13.5□□□□□ -0.25
CLIP2-203ENST00000395060 PPP3R1P63098 170 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 C19orf57Q0VDD7 668 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 FAM71E1Q6IPT2 247 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 CHMP1BQ7LBR1 199 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 KIF18BQ86Y91 864 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 DOK4Q8TEW6 326 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 SPRYD4Q8WW59 207 aaPredicted RBP13.5□□□□□ -0.25
CLIP2-203ENST00000395060 MED20Q9H944 212 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 ISG20L2Q9H9L3 353 aaKnown RBP13.5□□□□□ -0.25
CLIP2-203ENST00000395060 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 CDK2AP1O14519 115 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 ERAL1O75616 437 aaKnown RBP13.5□□□□□ -0.25
CLIP2-203ENST00000395060 TP53P04637 393 aaPredicted RBP13.5□□□□□ -0.25
CLIP2-203ENST00000395060 TFPIP10646 304 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 UBL4AP11441 157 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 HOXD10P28358 340 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 GABRR2P28476 465 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 GPR4P46093 362 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 CCR6P51684 374 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 CLDN20P56880 219 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 RAET1GQ6H3X3 334 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 ADCK2Q7Z695 626 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 TMEM150AQ86TG1 271 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 NR2C2APQ86WQ0 139 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 NPAS4Q8IUM7 802 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 LRRC17Q8N6Y2 441 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 AMER3Q8N944 861 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 ANKK1Q8NFD2 765 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 OR51G2Q8NGK0 314 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 OR8D4Q8NGM9 314 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 TMEM169Q96HH4 297 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 BRF2Q9HAW0 419 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 ENAMQ9NRM1 1142 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 KCNN3Q9UGI6 736 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 DOCK6Q96HP0 2047 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 PRAMEF27A3QJZ7 478 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 NEDD8-MDP1E9PL57 170 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 FAAHO00519 579 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 OR7A10O76100 309 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 PDGFAP04085 211 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 CDH11P55287 796 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 STXBP1P61764 594 aaKnown RBP13.5□□□□□ -0.25
CLIP2-203ENST00000395060 NOGQ13253 232 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 TNK1Q13470 666 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 ARSIQ5FYB1 569 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 QSOX2Q6ZRP7 698 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 IZUMO1Q8IYV9 350 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 ZNF655Q8N720 491 aaPredicted RBP13.5□□□□□ -0.25
CLIP2-203ENST00000395060 OR11H7Q8NGC8 314 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 HMGB4Q8WW32 186 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 SECISBP2Q96T21 854 aaKnown RBP13.5□□□□□ -0.25
CLIP2-203ENST00000395060 MCOLN1Q9GZU1 580 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 RNF32Q9H0A6 362 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 CXXC1Q9P0U4 656 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms