RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 MSANTD3Q96H12 275 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 ADAD1Q96M93 576 aaKnown RBP10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 ERMAPQ96PL5 475 aaPredicted RBP10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 MCUBQ9NWR8 336 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 IL20RAQ9UHF4 553 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 A0A1W2PPW3 197 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 C11orf98E9PRG8 122 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 PRAMEF2O60811 474 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 TSPAN12O95859 305 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 SDC2P34741 201 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 AFF3P51826 1226 aaKnown RBP10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 SYPL1Q16563 259 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 ALG10BQ5I7T1 473 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 KIAA1211LQ6NV74 962 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 ATCAYQ86WG3 371 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 SLC37A2Q8TED4 501 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 TMEM234Q8WY98 164 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 CCDC115Q96NT0 180 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 ASPNQ9BXN1 380 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 GRHPRQ9UBQ7 328 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 PCDHGB1Q9Y5G3 927 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 TRIM3O75382 744 aaPredicted RBP10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 GPR75O95800 540 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 AIFM1O95831 613 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 DCNP07585 359 aaKnown RBP10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 HK1P19367 917 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 PPP2CBP62714 309 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 PPP2CAP67775 309 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 FAM83HQ6ZRV2 1179 aaPredicted RBP10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 FANK1Q8TC84 345 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 PATE1Q8WXA2 126 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 EZH1Q92800 747 aaPredicted RBP10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 TMEM80Q96HE8 168 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 C1QTNF2Q9BXJ5 285 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 FOXQ1Q9C009 403 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 AGPAT4Q9NRZ5 378 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 RIMS3Q9UJD0 308 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 ERVK-19Q9WJR5 959 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 PCDHA9Q9Y5H5 950 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 PEX16Q9Y5Y5 336 aa10.06□□□□□ -0.8
MTHFD2-201ENST00000394053 CCDC182A6NF36 153 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 C17orf105B2RV13 164 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 TP53I11O14683 189 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 TNFRSF10CO14798 259 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 SRPX2O60687 465 aaPredicted RBP10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 SRFP11831 508 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 SLC19A1P41440 591 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 OR1D4P47884 311 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 DNASE1L1P49184 302 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 EIF2B2P49770 351 aaKnown RBP10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 TUBB3Q13509 450 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 EXOSC7Q15024 291 aaKnown RBP10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 XKR7Q5GH72 579 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 CCNJQ5T5M9 372 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 ERI1Q8IV48 349 aaKnown RBP10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 HTRA1Q92743 480 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 C12orf43Q96C57 262 aaKnown RBP10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 PLEKHA1Q9HB21 404 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 TCF7L1Q9HCS4 588 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 ACSS1Q9NUB1 689 aaPredicted RBP10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 TUBA8Q9NY65 449 aaPredicted RBP10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 ERVK-18Q9QC07 812 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 A0A1B0GTL3 188 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 C2CD4DB7Z1M9 353 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 PLD2O14939 933 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 B3GALT4O96024 378 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 FURINP09958 794 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 STAT5AP42229 794 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 NR0B1P51843 470 aaKnown RBP10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 RACK1P63244 317 aaKnown RBP10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 HOXC5Q00444 222 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 RHAGQ02094 409 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 SLC3A1Q07837 685 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 PIP5KL1Q5T9C9 394 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 MEDAGQ5VYS4 303 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 USP43Q70EL4 1123 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 NRMQ8IXM6 262 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 DEFB123Q8N688 67 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 FRMD1Q8N878 549 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 MFSD9Q8NBP5 474 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 THEM6Q8WUY1 208 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 LRR1Q96L50 414 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 GAL3ST1Q99999 423 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 TTTY10Q9BZA0 68 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 HS3ST3A1Q9Y663 406 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 TRPM6Q9BX84 2022 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 NPIPA5A0A0B4J1W7 369 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 A0A1B0GVT2 93 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 FAM240BA0A1B0GVZ2 78 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 NPIPA7E9PJI5 369 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 NPIPA5E9PKD4 350 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 PLOD3O60568 738 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 TSC22D2O75157 780 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 CD160O95971 181 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 TACSTD2P09758 323 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 NPIPA8P0DM63 369 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 CKMT1AP12532 417 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 ARFIP1P53367 373 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 B4GALNT1Q00973 533 aa10.05□□□□□ -0.8
MTHFD2-201ENST00000394053 SMAD4Q13485 552 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms