RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PCSK6P29122 969 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 GCKP35557 465 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 LHX2P50458 406 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 GPX6P59796 221 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 SNTA1Q13424 505 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 CPSF6Q16630 551 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHMP3-202ENST00000393773 CYS1Q717R9 158 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 GOLGA7Q7Z5G4 137 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 P3H2Q8IVL5 708 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 WDSUB1Q8N9V3 476 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 L3MBTL4Q8NA19 623 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 OR14L1PQ8NHC6 308 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 REPS1Q96D71 796 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 OMA1Q96E52 524 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 SAYSD1Q9NPB0 183 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 PSD3Q9NYI0 1048 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 EIF3LQ9Y262 564 aaKnown RBP13.95□□□□□ -0.18
CHMP3-202ENST00000393773 CUBNO60494 3623 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 PRAMEF25A6NGN4 478 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 FOXE1O00358 373 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-202ENST00000393773 CTIFO43310 598 aaKnown RBP13.94□□□□□ -0.18
CHMP3-202ENST00000393773 UGT2B11O75310 529 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 ROS1P08922 2347 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 NT5EP21589 574 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 SPRP35270 261 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-202ENST00000393773 NEK2P51955 445 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 DIO3P55073 304 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 CLDN18P56856 261 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 IRF9Q00978 393 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 SRYQ05066 204 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 PLCXD2Q0VAA5 305 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 MGAT2Q10469 447 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 PRICKLE4Q2TBC4 344 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 C6orf163Q5TEZ5 329 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 ENPP6Q6UWR7 440 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 PRSS57Q6UWY2 283 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 RAPH1Q70E73 1250 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 YTHDF3Q7Z739 585 aaKnown RBP13.94□□□□□ -0.18
CHMP3-202ENST00000393773 TBC1D1Q86TI0 1168 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-202ENST00000393773 IFNEQ86WN2 208 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 TRIM42Q8IWZ5 723 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 SIMC1Q8NDZ2 872 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 OR4K14Q8NGD5 310 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 PPP1R14CQ8TAE6 165 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 RHEBL1Q8TAI7 183 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 NXNL1Q96CM4 212 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 MARK4Q96L34 752 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 PCNX3Q9H6A9 2034 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 MAT2BQ9NZL9 334 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 EHD3Q9NZN3 535 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 KLRF1Q9NZS2 232 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 ZNF639Q9UID6 485 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 EXO1Q9UQ84 846 aaKnown RBP13.94□□□□□ -0.18
CHMP3-202ENST00000393773 RNF11Q9Y3C5 154 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 ANGPTL3Q9Y5C1 460 aa13.94□□□□□ -0.18
CHMP3-202ENST00000393773 SONP18583 2426 aaKnown RBP13.94□□□□□ -0.18
CHMP3-202ENST00000393773 TRIM64A6NGJ6 449 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 TRIM64BA6NI03 449 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 SYCE1LA8MT33 242 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 B4DXG7 233 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 INAFM1C9JVW0 142 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 CCDC188H7C350 402 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 PLOD2O00469 737 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 EIF3HO15372 352 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHMP3-202ENST00000393773 CBR3O75828 277 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 CBX7O95931 251 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 TGM6O95932 706 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 ATP1B1P05026 303 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 ZNF708P17019 499 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 CHMP24386 653 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 PIK3CGP48736 1102 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 PCYT1AP49585 367 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 XKP51811 444 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 ALDH18A1P54886 795 aaKnown RBP13.93□□□□□ -0.18
CHMP3-202ENST00000393773 GAB1Q13480 694 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 GTF2H2Q13888 395 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 EXOSC7Q15024 291 aaKnown RBP13.93□□□□□ -0.18
CHMP3-202ENST00000393773 KBTBD12Q3ZCT8 623 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 GRTP1Q5TC63 336 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 GTF2H2CQ6P1K8 395 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 FAM111BQ6SJ93 734 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 NUP54Q7Z3B4 507 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 CTAGE3PQ8IX95 158 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 RDH11Q8TC12 318 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 KCTD4Q8WVF5 259 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 PIGTQ969N2 578 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 SERPINI1Q99574 410 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 CCL19Q99731 98 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 NDRG3Q9UGV2 375 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 CR1P17927 2039 aa13.93□□□□□ -0.18
CHMP3-202ENST00000393773 OR7A17O14581 309 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 MSTNO14793 375 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 CASKO14936 926 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 SMAD7O15105 426 aaKnown RBP13.92□□□□□ -0.18
CHMP3-202ENST00000393773 ACOX3O15254 700 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 GFAPP14136 432 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 PORP16435 677 aaPredicted RBP13.92□□□□□ -0.18
CHMP3-202ENST00000393773 CRYGSP22914 178 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 LOXP28300 417 aaPredicted RBP13.92□□□□□ -0.18
CHMP3-202ENST00000393773 CRABP2P29373 138 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms