RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CYGBQ8WWM9 190 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 ATOH1Q92858 354 aaPredicted RBP8.08□□□□□ -1.12
TDP1-203ENST00000393454 CDS1Q92903 461 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 C7orf34Q96L11 122 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 OR6C1Q96RD1 312 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 GFM1Q96RP9 751 aaKnown RBP8.08□□□□□ -1.12
TDP1-203ENST00000393454 SPATA5L1Q9BVQ7 753 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 SMURF2Q9HAU4 748 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 ZNF304Q9HCX3 659 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 VNN3Q9NY84 501 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 LIPT1Q9Y234 373 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 PADI2Q9Y2J8 665 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 SAMHD1Q9Y3Z3 626 aaKnown RBP8.08□□□□□ -1.12
TDP1-203ENST00000393454 FAM32AQ9Y421 112 aaKnown RBP8.08□□□□□ -1.12
TDP1-203ENST00000393454 TESMINQ9Y4I5 508 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 NINQ8N4C6 2090 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 WDR87Q6ZQQ6 2873 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 A0A087WV62 115 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 A0A0G2JPF8 293 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 HNRNPCL2B2RXH8 293 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 HNRNPCL3B7ZW38 293 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 TGFBR3LH3BV60 316 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 DSCR3O14972 297 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 PLOD3O60568 738 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 AGR2O95994 175 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 IFNW1P05000 195 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 FESP07332 822 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 CHRM4P08173 479 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ALOX5P09917 674 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ANKRD34CP0C6C1 535 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 HNRNPCL4P0DMR1 293 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ACP2P11117 423 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 CD247P20963 164 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 DNAJA1P31689 397 aaKnown RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 ALDH3A2P51648 485 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 MAPK10P53779 464 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 HSD17B7P56937 341 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 MGAT2Q10469 447 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 DAG1Q14118 895 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ZNF267Q14586 743 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 LAPTM4AQ15012 233 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ZIK1Q3SY52 487 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 MINDY4Q4G0A6 757 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 SWT1Q5T5J6 900 aaKnown RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 FHL5Q5TD97 284 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ARHGAP40Q5TG30 622 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 VWA5B2Q8N398 1253 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 OR52R1Q8NGF1 315 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 RHBDD1Q8TEB9 315 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 RASSF5Q8WWW0 418 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 MVB12AQ96EY5 273 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 LOXL4Q96JB6 756 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 CNDP2Q96KP4 475 aaKnown RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 PTCHD1Q96NR3 888 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ZNF347Q96SE7 839 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 CXorf21Q9HAI6 301 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 BCL2L10Q9HD36 194 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 GIN1Q9NXP7 522 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 SMPD3Q9NY59 655 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 CALML5Q9NZT1 146 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 NDUFAF4Q9P032 175 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 GPC6Q9Y625 555 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 VPS13AQ96RL7 3174 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 A0A1B0GX78 115 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 A8MVJ9 347 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 HS6ST1O60243 411 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 SNAP29O95721 258 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 LDOC1O95751 146 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 ALPPP05187 535 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 RRM2P31350 389 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 SOX18P35713 384 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 PGDP52209 483 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 PDX1P52945 283 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 IL1RL1Q01638 556 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 SPIBQ01892 262 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 CHRNEQ04844 493 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ZNF155Q12901 538 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 DUSP5Q16690 384 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 NHSL2Q5HYW2 709 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 YOD1Q5VVQ6 348 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 MLIPQ5VWP3 458 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 SHQ1Q6PI26 577 aaKnown RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 PRSS58Q8IYP2 241 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 DHRSXQ8N5I4 330 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 COX18Q8N8Q8 333 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 CDRT4Q8N9R6 151 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 VANGL1Q8TAA9 524 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 GPR151Q8TDV0 419 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 TRNT1Q96Q11 434 aaKnown RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 ZNF300Q96RE9 604 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 NR1H4Q96RI1 486 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 RBM4BQ9BQ04 359 aaKnown RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 ADI1Q9BV57 179 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 CNPPD1Q9BV87 410 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 RBM4Q9BWF3 364 aaKnown RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 AMBRA1Q9C0C7 1298 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 QRSL1Q9H0R6 528 aaKnown RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 CACYBPQ9HB71 228 aaKnown RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 NECTIN3Q9NQS3 549 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 PNO1Q9NRX1 252 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms