RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ACRP10323 421 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 CEBPBP17676 345 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 NCBP2P52298 156 aaKnown RBP eCLIP17.75■□□□□ 0.43
CBX1-202ENST00000393408 CSNK1G2P78368 415 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 UBE3AQ05086 875 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 SLAMF1Q13291 335 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 ELAVL3Q14576 367 aaKnown RBP17.75■□□□□ 0.43
CBX1-202ENST00000393408 GPR19Q15760 415 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 DUSP6Q16828 381 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 UAP1L1Q3KQV9 507 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 TBRG1Q3YBR2 411 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 C6orf183Q5T699 404 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 DDI2Q5TDH0 399 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 ADAMTSL4Q6UY14 1074 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 SLC36A4Q6YBV0 504 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 QSOX2Q6ZRP7 698 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 LRRTM4Q86VH4 590 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 MRPL43Q8N983 215 aaKnown RBP17.75■□□□□ 0.43
CBX1-202ENST00000393408 KATNB1Q9BVA0 655 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 C11orf54Q9H0W9 315 aaPredicted RBP17.75■□□□□ 0.43
CBX1-202ENST00000393408 IRGMA1A4Y4 181 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 FGBP02675 491 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 BUD31P41223 144 aaPredicted RBP17.74■□□□□ 0.43
CBX1-202ENST00000393408 ZNF793Q6ZN11 406 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 MEX3DQ86XN8 651 aaKnown RBP17.74■□□□□ 0.43
CBX1-202ENST00000393408 RDH10Q8IZV5 341 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 LINC01555Q8NAE3 123 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 SYT14Q8NB59 555 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 GATAD2BQ8WXI9 593 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 C1GALT1C1Q96EU7 318 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 C17orf62Q9BQA9 187 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 CENPXA8MT69 81 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 POLR1CO15160 346 aaPredicted RBP17.74■□□□□ 0.43
CBX1-202ENST00000393408 TMCC2O75069 709 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 EFCAB14O75071 495 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 PRKRAO75569 313 aaKnown RBP17.74■□□□□ 0.43
CBX1-202ENST00000393408 CLTBP09497 229 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 SSR2P43308 183 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 SLC6A11P48066 632 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 DAB2P98082 770 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 MINDY4Q4G0A6 757 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 PDZK1Q5T2W1 519 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 GRASPQ7Z6J2 395 aaPredicted RBP17.74■□□□□ 0.43
CBX1-202ENST00000393408 ETFBKMTQ8IXQ9 262 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 SUN3Q8TAQ9 357 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 CXorf40AQ8TE69 158 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 KIAA1143Q96AT1 154 aaPredicted RBP17.74■□□□□ 0.43
CBX1-202ENST00000393408 DMRTB1Q96MA1 342 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 YIPF4Q9BSR8 244 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 SAP130Q9H0E3 1048 aa17.74■□□□□ 0.43
CBX1-202ENST00000393408 A0A087WUU8 490 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 MAN2B1O00754 1011 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 SLC30A4O14863 429 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 CASC3O15234 703 aaKnown RBP17.73■□□□□ 0.43
CBX1-202ENST00000393408 CLEC3AO75596 197 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 ADH1CP00326 375 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 SERPIND1P05546 499 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 PTGER1P34995 402 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 GJA8P48165 433 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 PRKAG1P54619 331 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 TAS2R38P59533 333 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 CRTC2Q53ET0 693 aaPredicted RBP17.73■□□□□ 0.43
CBX1-202ENST00000393408 ZNF628Q5EBL2 1059 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 SLC35F1Q5T1Q4 408 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 SLC27A4Q6P1M0 643 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 TMEM64Q6YI46 380 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 OR8D4Q8NGM9 314 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 TEX47Q8TBZ9 253 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 SLC9A6Q92581 669 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 TM9SF2Q99805 663 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 LGR4Q9BXB1 951 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 PINK1Q9BXM7 581 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 GPR52Q9Y2T5 361 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 SMIM30A4D0T7 59 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 LRIT2A6NDA9 550 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 CCDC182A6NF36 153 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 A6NL46 340 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 UBXN7O94888 489 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 FHP07954 510 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 CCL5P13501 91 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 NTSP30990 170 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 MTNR1AP48039 350 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 MRPS15P82914 257 aaKnown RBP17.73■□□□□ 0.43
CBX1-202ENST00000393408 C1orf53Q5VUE5 145 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 ZNF730Q6ZMV8 503 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 VWA5B2Q8N398 1253 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 UFD1Q92890 307 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 BBS4Q96RK4 519 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 TOR4AQ9NXH8 423 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 EXOSC1Q9Y3B2 195 aaKnown RBP17.73■□□□□ 0.43
CBX1-202ENST00000393408 NOX1Q9Y5S8 564 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 MYO10Q9HD67 2058 aa17.73■□□□□ 0.43
CBX1-202ENST00000393408 IGKV1-8A0A0C4DH67 115 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 A0A0G2JPF8 293 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 GLOD5A6NK44 160 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 SNTNA6NMZ2 147 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 KDM4EB2RXH2 506 aaPredicted RBP17.72■□□□□ 0.43
CBX1-202ENST00000393408 HNRNPCL2B2RXH8 293 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 B4DXG7 233 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 HNRNPCL3B7ZW38 293 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms