RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 RPH3ALQ9UNE2 315 aa5.85□□□□□ -1.47
TRAV35-201ENST00000390462 DIMT1Q9UNQ2 313 aaKnown RBP5.85□□□□□ -1.47
TRAV35-201ENST00000390462 SATB2Q9UPW6 733 aa5.85□□□□□ -1.47
TRAV35-201ENST00000390462 TAF1LQ8IZX4 1826 aa5.85□□□□□ -1.47
TRAV35-201ENST00000390462 N4BP2Q86UW6 1770 aaPredicted RBP5.85□□□□□ -1.47
TRAV35-201ENST00000390462 C5P01031 1676 aa5.85□□□□□ -1.47
TRAV35-201ENST00000390462 BRCA1P38398 1863 aaKnown RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 MYO3BQ8WXR4 1341 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 A0A1B0GVL5 298 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 OR5K3A6NET4 321 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 YJEFN3A6XGL0 299 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 C12orf71A8MTZ7 269 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 TIMM23O14925 209 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 LSM1O15116 133 aaKnown RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 MDM4O15151 490 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 STX7O15400 261 aaKnown RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 NBR2O15453 112 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 BUD23O43709 281 aaKnown RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 EML2O95834 649 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 HPRP00739 348 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 FTH1P02794 183 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 CLTAP09496 248 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 NCK1P16333 377 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 MSH3P20585 1137 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 LAP3P28838 519 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 ALDH1B1P30837 517 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 PDX1P52945 283 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 CLDN17P56750 224 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 DAOAP59103 153 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 BLOC1S1P78537 153 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 OTUD4Q01804 1114 aaKnown RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 NAAAQ02083 359 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 CCDC173Q0VFZ6 552 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 TRAP1Q12931 704 aaKnown RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 CEACAM7Q14002 265 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 AANATQ16613 207 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 DUSP6Q16828 381 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 ODF4Q2M2E3 257 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 C6orf226Q5I0X4 101 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 PIK3CD-AS1Q5SR53 167 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 TMEM220Q6QAJ8 160 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 OLFML1Q6UWY5 402 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 DEF8Q6ZN54 512 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 NLRP9Q7RTR0 991 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 LINC00523Q86TU6 105 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 PARGQ86W56 976 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 TMEM139Q8IV31 216 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 SLC38A6Q8IZM9 456 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 SLC44A3Q8N4M1 653 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 FAM83FQ8NEG4 500 aaPredicted RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 OR5AU1Q8NGC0 362 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 SCFD1Q8WVM8 642 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 ASB5Q8WWX0 329 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 ST8SIA1Q92185 356 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 SLC25A36Q96CQ1 311 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 SH3YL1Q96HL8 342 aaPredicted RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 AKR1E2Q96JD6 320 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 ACCSQ96QU6 501 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 CCT8L2Q96SF2 557 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 CCDC3Q9BQI4 270 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 CENPKQ9BS16 269 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 EFHD1Q9BUP0 239 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 CCDC94Q9BW85 323 aaPredicted RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 RAB11FIP5Q9BXF6 653 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 C1QTNF3Q9BXJ4 246 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 POLDIP3Q9BY77 421 aaKnown RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 LRMDAQ9H2I8 198 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 FBXO44Q9H4M3 255 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 UBTD1Q9HAC8 227 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 PLEK2Q9NYT0 353 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 NLGN3Q9NZ94 848 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 SRPRBQ9Y5M8 271 aaKnown RBP5.84□□□□□ -1.47
TRAV35-201ENST00000390462 NPTNQ9Y639 398 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 DUSP10Q9Y6W6 482 aa5.84□□□□□ -1.47
TRAV35-201ENST00000390462 SLIT3O75094 1523 aa5.84□□□□□ -1.48
TRAV35-201ENST00000390462 KIF13BQ9NQT8 1826 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 INSRP06213 1382 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 TRBV5-3A0A0A0MS03 114 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 MANSC4A6NHS7 340 aaPredicted RBP5.83□□□□□ -1.48
TRAV35-201ENST00000390462 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.83□□□□□ -1.48
TRAV35-201ENST00000390462 H3BTX0 84 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 BTN3A3O00478 584 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 DUX1O43812 170 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 SORBS2O94875 1100 aaKnown RBP5.83□□□□□ -1.48
TRAV35-201ENST00000390462 MCF2P10911 925 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 HTR2BP41595 481 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 YWHAGP61981 247 aaKnown RBP eCLIP5.83□□□□□ -1.48
TRAV35-201ENST00000390462 HERVK_113P63132 956 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 ERVK-8P63133 956 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 CSNK2BP67870 215 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 TGFBIQ15582 683 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 ACSF3Q4G176 576 aaPredicted RBP5.83□□□□□ -1.48
TRAV35-201ENST00000390462 PAPPA-AS1Q5QFB9 102 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 ASPHD1Q5U4P2 390 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 KCNIP4Q6PIL6 250 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 CWC27Q6UX04 472 aaKnown RBP5.83□□□□□ -1.48
TRAV35-201ENST00000390462 TMEM107Q6UX40 140 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 ZNF841Q6ZN19 808 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 COX8CQ7Z4L0 72 aa5.83□□□□□ -1.48
TRAV35-201ENST00000390462 PTOV1Q86YD1 416 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms