RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 ZNF224Q9NZL3 707 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 EPHA6Q9UF33 1036 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 ING4Q9UNL4 249 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 COPS3Q9UNS2 423 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 DTX4Q9Y2E6 619 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 ANAPC1Q9H1A4 1944 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 A0A0U1RQF3 1178 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 A0A1B0GVI7 797 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 CDC7O00311 574 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 EPHA8P29322 1005 aaPredicted RBP6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 SSTR4P31391 388 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 PSMB10P40306 273 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 NDUFV1P49821 464 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 TRA2BP62995 288 aaKnown RBP6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 EFNB1P98172 346 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 HSF2Q03933 536 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 CAMK1Q14012 370 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 FCN2Q15485 313 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 MED22Q15528 200 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 DUSP6Q16828 381 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 GPR33Q49SQ1 333 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 HACD4Q5VWC8 232 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 BICRALQ6AI39 1079 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 PAQR3Q6TCH7 311 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 QSOX2Q6ZRP7 698 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 RAB11FIP2Q7L804 512 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 PRICKLE2Q7Z3G6 844 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 GOLGA7Q7Z5G4 137 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 ABI3BPQ7Z7G0 1075 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 MRPL10Q7Z7H8 261 aaKnown RBP6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 LDB1Q86U70 411 aaPredicted RBP6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 CDH26Q8IXH8 852 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 SLC37A3Q8NCC5 494 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 ZNF485Q8NCK3 441 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 ARRDC4Q8NCT1 418 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 DMBX1Q8NFW5 382 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 INTS12Q96CB8 462 aaKnown RBP6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 MRGPRX1Q96LB2 322 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 ATF6BQ99941 703 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 WACQ9BTA9 647 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 MND1Q9BWT6 205 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 FSD1LQ9BXM9 530 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 SLC39A8Q9C0K1 460 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 CRISPLD1Q9H336 500 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 CHODLQ9H9P2 273 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 MRPS18AQ9NVS2 196 aaKnown RBP6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 SDHAF2Q9NX18 166 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 HCN2Q9UL51 889 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 RAB23Q9ULC3 237 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 DAPP1Q9UN19 280 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 PCDHGA5Q9Y5G8 931 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 PCDHGA1Q9Y5H4 931 aa6.32□□□□□ -1.4
CDKAL1-202ENST00000378610 H0Y8X5 98 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 SNAPC5O75971 98 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 PNPP00491 289 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 GJB1P08034 283 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 SLC2A2P11168 524 aaPredicted RBP6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 SRCP12931 536 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 CPT2P23786 658 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 PSMA1P25786 263 aaKnown RBP6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 ADORA2BP29275 332 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 NTF4P34130 210 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 CLCN4P51793 760 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 ACTR1AP61163 376 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 CSTF3Q12996 717 aaKnown RBP6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 BTN1A1Q13410 526 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 PPIGQ13427 754 aaKnown RBP eCLIP6.31□□□□□ -1.41e-6■■□□□ 12.5
CDKAL1-202ENST00000378610 ETFDHQ16134 617 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 TRIM60Q495X7 471 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 SPIN4Q56A73 249 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 ZRANB3Q5FWF4 1079 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 SIRPB2Q5JXA9 342 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 SCIMPQ6UWF3 145 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 ZNF600Q6ZNG1 722 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 CFAP77Q6ZQR2 320 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 RNF44Q7L0R7 432 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 HSD17B13Q7Z5P4 300 aaPredicted RBP6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 VTCN1Q7Z7D3 282 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 ZNF683Q8IZ20 524 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 Q8N402 240 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 DTWD2Q8NBA8 298 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 PCSK9Q8NBP7 692 aaKnown RBP6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 ARRDC2Q8TBH0 407 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 FANK1Q8TC84 345 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 HSD17B8Q92506 261 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 MR1Q95460 341 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 TRIM43Q96BQ3 446 aaPredicted RBP6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 SENP5Q96HI0 755 aaPredicted RBP6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 FOPNLQ96NB1 174 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 FEVQ99581 238 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 NIPSNAP1Q9BPW8 284 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 INPP5KQ9BT40 448 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 MRPL15Q9P015 296 aaKnown RBP6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 NDUFAF4Q9P032 175 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 NLKQ9UBE8 527 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 TESQ9UGI8 421 aaKnown RBP6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 TRAV19A0A0A6YYK7 116 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 OR51F1A6NGY5 319 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 YJEFN3A6XGL0 299 aa6.31□□□□□ -1.4
CDKAL1-202ENST00000378610 INMT-MINDY4F8WBC2 141 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms