RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 GPR83Q9NYM4 423 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 CENPBD1B2RD01 187 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 WASH3PC4AMC7 463 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 NPIPA5E9PKD4 350 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 J3QLW9 94 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 FAAHO00519 579 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 CYB5AP00167 134 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 JMJD7P0C870 316 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF19P17023 458 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 ABCA11PQ4W5N1 156 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 HAGHLQ6PII5 290 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-201ENST00000378156 PIWIL3Q7Z3Z3 882 aaKnown RBP14.28□□□□□ -0.12
NPHP4-201ENST00000378156 DCP2Q8IU60 420 aaKnown RBP14.28□□□□□ -0.12
NPHP4-201ENST00000378156 ABHD11Q8NFV4 315 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 NKD1Q969G9 470 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 NXPE2Q96DL1 559 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 ANKMY1Q9P2S6 941 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 NPIPA1Q9UND3 350 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 STRCQ7RTU9 1775 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 M0R036 132 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 RP2O75695 350 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 NR2C1P13056 603 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF26P17031 533 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-201ENST00000378156 PGFP49763 221 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 SEC23BQ15437 767 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 GAREM2Q75VX8 874 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 ANKRD13BQ86YJ7 626 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 GTF2H4Q92759 462 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 S100A16Q96FQ6 103 aaKnown RBP14.28□□□□□ -0.12
NPHP4-201ENST00000378156 GPR78Q96P69 363 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 HIST1H2AAQ96QV6 131 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 PELI2Q9HAT8 420 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 PCDHGB2Q9Y5G2 931 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 CDH10Q9Y6N8 788 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 SCN9AQ15858 1988 aa14.28□□□□□ -0.12
NPHP4-201ENST00000378156 OR52A4PA6NMU1 304 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 EDNRAP25101 427 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 ARRB2P32121 409 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 DPP6P42658 865 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 SLC6A11P48066 632 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 OR12D2P58182 307 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 TAS2R38P59533 333 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 SNTA1Q13424 505 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 ARFRP1Q13795 201 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 NNATQ16517 81 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 LIPKQ5VXJ0 399 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 SLC27A4Q6P1M0 643 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 TMEM207Q6UWW9 146 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 SLC36A4Q6YBV0 504 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.27□□□□□ -0.12
NPHP4-201ENST00000378156 OR52P1PQ8NH57 321 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 TMEM45AQ9NWC5 275 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 A0A1B0GVC2 190 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 LRRN3E7EW58 273 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 HCRTR2O43614 444 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 BCAS1O75363 584 aaPredicted RBP14.27□□□□□ -0.12
NPHP4-201ENST00000378156 PLGP00747 810 aaPredicted RBP14.27□□□□□ -0.12
NPHP4-201ENST00000378156 LCKP06239 509 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 CRISP1P54107 249 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 MC1RQ01726 317 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 MAPK14Q16539 360 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 NDUFAF5Q5TEU4 345 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 RNF175Q8N4F7 328 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 OR52N2Q8NGI0 321 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 MR1Q95460 341 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 MAELQ96JY0 434 aaKnown RBP14.27□□□□□ -0.12
NPHP4-201ENST00000378156 LRRN3Q9H3W5 708 aa14.27□□□□□ -0.12
NPHP4-201ENST00000378156 GRXCR2A6NFK2 248 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 VAMP2P63027 116 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 UGT3A2Q3SY77 523 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 LRRC69Q6ZNQ3 347 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 UBE2Q1Q7Z7E8 422 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 PELI3Q8N2H9 469 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
NPHP4-201ENST00000378156 OR2L2Q8NH16 312 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 ASB12Q8WXK4 309 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 MYLIPQ8WY64 445 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 TRIM43Q96BQ3 446 aaPredicted RBP14.27□□□□□ -0.13
NPHP4-201ENST00000378156 BCL7BQ9BQE9 202 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 NTMT1Q9BV86 223 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 ACTR6Q9GZN1 396 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 CHMP1AQ9HD42 196 aaPredicted RBP14.27□□□□□ -0.13
NPHP4-201ENST00000378156 SLC35F4A4IF30 521 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 RHCEP18577 417 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 PVALBP20472 110 aaPredicted RBP14.27□□□□□ -0.13
NPHP4-201ENST00000378156 MAPK3P27361 379 aaPredicted RBP14.27□□□□□ -0.13
NPHP4-201ENST00000378156 MAP2K3P46734 347 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 SLC3A1Q07837 685 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 KLHL26Q53HC5 615 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 PDZD3Q86UT5 571 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 YIPF7Q8N8F6 280 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 GATSQ8NAP1 163 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 DENND6BQ8NEG7 585 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 OR2T11Q8NH01 316 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 RPLP0P6Q8NHW5 317 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF350Q9GZX5 532 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 METTL8Q9H825 291 aaKnown RBP14.27□□□□□ -0.13
NPHP4-201ENST00000378156 C14orf119Q9NWQ9 140 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 GRHPRQ9UBQ7 328 aa14.27□□□□□ -0.13
NPHP4-201ENST00000378156 HS3ST2Q9Y278 367 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms