RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 MAPK12P53778 367 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 GALNT1Q10472 559 aaPredicted RBP13.61□□□□□ -0.23
CLCN6-204ENST00000376491 MAP4K2Q12851 820 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 FOXF2Q12947 444 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 SF3B4Q15427 424 aaKnown RBP eCLIP13.61□□□□□ -0.231e-8■■■■□ 21.9
CLCN6-204ENST00000376491 GGTA1PQ4G0N0 100 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 SGO1Q5FBB7 561 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 TTC19Q6DKK2 380 aaPredicted RBP13.61□□□□□ -0.23
CLCN6-204ENST00000376491 FAM180BQ6P0A1 224 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 PLXDC2Q6UX71 529 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 NUP54Q7Z3B4 507 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 COMMD6Q7Z4G1 85 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 VWA5B2Q8N398 1253 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 WDSUB1Q8N9V3 476 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 ADCY4Q8NFM4 1077 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 OR4F6Q8NGB9 312 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 ZPLD1Q8TCW7 415 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 TRPC4APQ8TEL6 797 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 ISL2Q96A47 359 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 TM4SF18Q96CE8 201 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 CTHRC1Q96CG8 243 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 MBD6Q96DN6 1003 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 OMA1Q96E52 524 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 OSBPL11Q9BXB4 747 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 ACSS3Q9H6R3 686 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 METTL7AQ9H8H3 244 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 GALNT9Q9HCQ5 603 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 AHSPQ9NZD4 102 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 NINJ2Q9NZG7 142 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 XPR1Q9UBH6 696 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 BCAP29Q9UHQ4 241 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 RPH3AQ9Y2J0 694 aaPredicted RBP13.61□□□□□ -0.23
CLCN6-204ENST00000376491 PLLPQ9Y342 182 aa13.61□□□□□ -0.23
CLCN6-204ENST00000376491 C1orf226A1L170 272 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 EEF1E1-BLOC1S5C9J1V9 151 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 EEF1E1O43324 174 aaKnown RBP13.6□□□□□ -0.23
CLCN6-204ENST00000376491 CDH16O75309 829 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 UGT2B11O75310 529 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 ERAL1O75616 437 aaKnown RBP13.6□□□□□ -0.23
CLCN6-204ENST00000376491 ATE1O95260 518 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 ACTL6AO96019 429 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 ATP1B1P05026 303 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 RBP1P09455 135 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 CNTFP26441 200 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 CASQ1P31415 396 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 OPRM1P35372 400 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 IFT88Q13099 833 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 LTB4RQ15722 352 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 TRMT12Q53H54 448 aaKnown RBP13.6□□□□□ -0.23
CLCN6-204ENST00000376491 C6orf163Q5TEZ5 329 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 SLC30A6Q6NXT4 461 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 LETMD1Q6P1Q0 360 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 PAGE2Q7Z2X7 111 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 ZNF572Q7Z3I7 529 aaPredicted RBP13.6□□□□□ -0.23
CLCN6-204ENST00000376491 MILR1Q7Z6M3 343 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 KIF18BQ86Y91 864 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 C17orf53Q8N3J3 647 aaPredicted RBP13.6□□□□□ -0.23
CLCN6-204ENST00000376491 SLC44A1Q8WWI5 657 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 LCORQ96JN0 433 aaPredicted RBP13.6□□□□□ -0.23
CLCN6-204ENST00000376491 TUBA1CQ9BQE3 449 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 PCNX3Q9H6A9 2034 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 PLEKHF2Q9H8W4 249 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 SERHLQ9NQF3 203 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 EHD3Q9NZN3 535 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 ZNF225Q9UK10 706 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 SLC12A4Q9UP95 1085 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 MAPRE3Q9UPY8 281 aa13.6□□□□□ -0.23
CLCN6-204ENST00000376491 EXO1Q9UQ84 846 aaKnown RBP13.6□□□□□ -0.23
CLCN6-204ENST00000376491 FLNAP21333 2647 aaKnown RBP13.59□□□□□ -0.23
CLCN6-204ENST00000376491 A0A1W2PPR1 153 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 PDYNP01213 254 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 RAF1P04049 648 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 RPS17P08708 135 aaKnown RBP13.59□□□□□ -0.23
CLCN6-204ENST00000376491 SBK3P0C264 359 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 RHOXF2BP0C7M4 288 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 TMIGD3P0DMS9 266 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-204ENST00000376491 CPN1P15169 458 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 TSPAN8P19075 237 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 CSNK2A2P19784 350 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-204ENST00000376491 DEKP35659 375 aaKnown RBP13.59□□□□□ -0.23
CLCN6-204ENST00000376491 EMDP50402 254 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 CDH13P55290 713 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 SORDQ00796 357 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 PLCXD2Q0VAA5 305 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 RCAN2Q14206 197 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 C10orf62Q5T681 223 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-204ENST00000376491 CAMKMTQ7Z624 323 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 ADGRE4PQ86SQ3 457 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 OR52R1Q8NGF1 315 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 RDH11Q8TC12 318 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 CNRIP1Q96F85 164 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-204ENST00000376491 ZNF681Q96N22 645 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 LRRC1Q9BTT6 524 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 G6PC3Q9BUM1 346 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 FUT8Q9BYC5 575 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 OR2B2Q9GZK3 357 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 ELOVL6Q9H5J4 265 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 EDARQ9UNE0 448 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 CFL2Q9Y281 166 aa13.59□□□□□ -0.23
CLCN6-204ENST00000376491 GOLGA6L10A6NI86 522 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms