RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ADGRF3Q8IZF5 1079 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 SLC38A6Q8IZM9 456 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 TBC1D19Q8N5T2 526 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 OR9A1PQ8NGU1 263 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 SMPDL3AQ92484 453 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 MAP6Q96JE9 813 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 TREX2Q9BQ50 279 aaPredicted RBP19.95■□□□□ 0.78
UPF3A-202ENST00000375299 ABCG4Q9H172 646 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 EGLN3Q9H6Z9 239 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 GPR52Q9Y2T5 361 aa19.95■□□□□ 0.78
UPF3A-202ENST00000375299 SHISA3A0PJX4 238 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 SHOXO15266 292 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 GSTM3P21266 225 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 CFL1P23528 166 aaKnown RBP19.94■□□□□ 0.78
UPF3A-202ENST00000375299 ADAM15Q13444 863 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 SYPL1Q16563 259 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 NATD1Q8N6N6 113 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 ANKK1Q8NFD2 765 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 NEIL3Q8TAT5 605 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 WACQ9BTA9 647 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 TMED9Q9BVK6 235 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 SERHL2Q9H4I8 314 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 GABRPO00591 440 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 TBX19O60806 448 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 INHAP05111 366 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 SLC1A3P43003 542 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 SLC6A11P48066 632 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 AGFG1P52594 562 aaKnown RBP19.94■□□□□ 0.78
UPF3A-202ENST00000375299 CTBP2P56545 445 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 UBE3AQ05086 875 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 SIX5Q8N196 739 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 OR2A12Q8NGT7 310 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 TEX47Q8TBZ9 253 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 CD99L2Q8TCZ2 262 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 DNAJA4Q8WW22 397 aaPredicted RBP19.94■□□□□ 0.78
UPF3A-202ENST00000375299 SAP130Q9H0E3 1048 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 TBC1D17Q9HA65 648 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 MRPL17Q9NRX2 175 aaKnown RBP19.94■□□□□ 0.78
UPF3A-202ENST00000375299 AHSPQ9NZD4 102 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 P2RX2Q9UBL9 471 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 INSL5Q9Y5Q6 135 aa19.94■□□□□ 0.78
UPF3A-202ENST00000375299 PRAMEF27A3QJZ7 478 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 KDM4EB2RXH2 506 aaPredicted RBP19.93■□□□□ 0.78
UPF3A-202ENST00000375299 WASH3PC4AMC7 463 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 PLPP1O14494 284 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 SLC19A2O60779 497 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 HLA-DPB1P04440 258 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 DSG2Q14126 1118 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 ANGPT1Q15389 498 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 UAP1L1Q3KQV9 507 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 ZNF782Q6ZMW2 699 aaPredicted RBP19.93■□□□□ 0.78
UPF3A-202ENST00000375299 MRGPREQ86SM8 312 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 LHFPL3Q86UP9 236 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 TM4SF18Q96CE8 201 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 CHFRQ96EP1 664 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 RNF32Q9H0A6 362 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 SLC28A3Q9HAS3 691 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 SOD2P04179 222 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 HOXD10P28358 340 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 BTG1P62324 171 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 ZNF658BQ4V348 819 aaPredicted RBP19.93■□□□□ 0.78
UPF3A-202ENST00000375299 BICRALQ6AI39 1079 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 ASTLQ6HA08 431 aaPredicted RBP19.93■□□□□ 0.78
UPF3A-202ENST00000375299 SLC27A4Q6P1M0 643 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 OTULINQ96BN8 352 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 HMX1Q9NP08 348 aaPredicted RBP19.93■□□□□ 0.78
UPF3A-202ENST00000375299 POLHQ9Y253 713 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 SLC9A8Q9Y2E8 581 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 MYOFQ9NZM1 2061 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 CKAP5Q14008 2032 aa19.93■□□□□ 0.78
UPF3A-202ENST00000375299 RFPL3O75679 317 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 UBXN7O94888 489 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 HK1P19367 917 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 GABRR2P28476 465 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 ANKRD54Q6NXT1 300 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.92■□□□□ 0.78
UPF3A-202ENST00000375299 CFAP206Q8IYR0 622 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 OR8H1Q8NGG4 311 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 PXYLP1Q8TE99 480 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 PRRC1Q96M27 445 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 NT5DC2Q9H857 520 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 FOLH1BQ9HBA9 442 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 C5AR2Q9P296 337 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 DENND4CQ5VZ89 1909 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 MEN1O00255 615 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 RTCAO00442 366 aaKnown RBP19.92■□□□□ 0.78
UPF3A-202ENST00000375299 TSC22D2O75157 780 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 PCBP4P57723 403 aaKnown RBP19.92■□□□□ 0.78
UPF3A-202ENST00000375299 ZBTB37Q5TC79 503 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 TECPR1Q7Z6L1 1165 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 GHDCQ8N2G8 530 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 OR6T1Q8NGN1 323 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 SLC38A2Q96QD8 506 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.92■□□□□ 0.78
UPF3A-202ENST00000375299 MAT2BQ9NZL9 334 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 KCNN3Q9UGI6 736 aa19.92■□□□□ 0.78
UPF3A-202ENST00000375299 KIAA1549LQ6ZVL6 1849 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 RB1P06400 928 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 POU3F3P20264 500 aaPredicted RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 FRKP42685 505 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms