RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 SLC51BQ86UW2 128 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ZFP90Q8TF47 636 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 RNF141Q8WVD5 230 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 FUBP1Q96AE4 644 aaKnown RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SLC39A13Q96H72 371 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 DGAT2Q96PD7 388 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 MFFQ9GZY8 342 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 DPEP3Q9H4B8 488 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SLC28A3Q9HAS3 691 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 GPR83Q9NYM4 423 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SARDHQ9UL12 918 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 FBXO7Q9Y3I1 522 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 PCDHA9Q9Y5H5 950 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 HSPB2A8KAH6 182 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 BDH1Q02338 343 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 HSPB2Q16082 182 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 C14orf28Q4W4Y0 310 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 DGLUCYQ7Z3D6 616 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 CFAP52Q8N1V2 620 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 DCBLD1Q8N8Z6 715 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.71□□□□□ -0.852e-6■■■■■ 64.7
PTCH1-204ENST00000375290 PEBP4Q96S96 227 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 SLC25A31Q9H0C2 315 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 RNF11Q9Y3C5 154 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 C9JVG2 144 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 NDUFS4O43181 175 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 GABRB3P28472 473 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 GALK2Q01415 458 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 RGNQ15493 299 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 PRSS55Q6UWB4 352 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM121BQ9BXQ6 578 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-204ENST00000375290 PTGES2Q9H7Z7 377 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 CTPS2Q9NRF8 586 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 RIDAP52758 137 aaKnown RBP9.71□□□□□ -0.85
PTCH1-204ENST00000375290 SH3BP2P78314 561 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 SLC18B1Q6NT16 456 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 CGB2Q6NT52 195 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 CD300LGQ6UXG3 332 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 LYSMD3Q7Z3D4 306 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 MCEMP1Q8IX19 187 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 HBEGFQ99075 208 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 TREX2Q9BQ50 279 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-204ENST00000375290 PELI2Q9HAT8 420 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 ADAM29Q9UKF5 820 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 CHATP28329 748 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 SSTP61278 116 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 RPS15AP62244 130 aaKnown RBP9.71□□□□□ -0.85
PTCH1-204ENST00000375290 GPR17Q13304 367 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 MRPL41Q8IXM3 137 aaKnown RBP9.71□□□□□ -0.85
PTCH1-204ENST00000375290 OR7D4Q8NG98 312 aa9.71□□□□□ -0.85
PTCH1-204ENST00000375290 TRIM43Q96BQ3 446 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-204ENST00000375290 ERI3O43414 337 aaKnown RBP9.71□□□□□ -0.86
PTCH1-204ENST00000375290 MAFKO60675 156 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 KLK1P06870 262 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 PDZD3Q86UT5 571 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF689Q96CS4 500 aaPredicted RBP9.71□□□□□ -0.86
PTCH1-204ENST00000375290 POLMQ9NP87 494 aaPredicted RBP9.71□□□□□ -0.86
PTCH1-204ENST00000375290 FAM212BQ9NTI7 297 aaPredicted RBP9.71□□□□□ -0.86
PTCH1-204ENST00000375290 OR4D2P58180 307 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 WDR5P61964 334 aaKnown RBP9.71□□□□□ -0.86
PTCH1-204ENST00000375290 MS4A2Q01362 244 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 PM20D1Q6GTS8 502 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 C12orf10Q9HB07 376 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 ROBO1Q9Y6N7 1651 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 HCRTR2O43614 444 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 TRMT10AQ8TBZ6 339 aaKnown RBP9.71□□□□□ -0.86
PTCH1-204ENST00000375290 GABARAPL1Q9H0R8 117 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 DNTTIP1Q9H147 329 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 LCMT2O60294 686 aaKnown RBP9.71□□□□□ -0.86
PTCH1-204ENST00000375290 C6orf47O95873 294 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 ADH1BP00325 375 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 UAP1L1Q3KQV9 507 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 RTL10Q7L3V2 364 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 METTL4Q8N3J2 472 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 ANKK1Q8NFD2 765 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 NINJ1Q92982 152 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 GSTO2Q9H4Y5 243 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF304Q9HCX3 659 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 IGSF5Q9NSI5 407 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 HSFX1Q9UBD0 423 aa9.71□□□□□ -0.86
PTCH1-204ENST00000375290 CIB4A0PJX0 185 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TMEM200CA6NKL6 621 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 HCKP08631 526 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 AKT2P31751 481 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 RPL22L1Q6P5R6 122 aaKnown RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 CBLL1Q75N03 491 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 S100A7AQ86SG5 101 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 ELMOD3Q96FG2 381 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 CMTM3Q96MX0 182 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 GSX2Q9BZM3 304 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SLC25A32Q9H2D1 315 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SLAMF7Q9NQ25 335 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TREX1Q9NSU2 369 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 A0A0U1RQF3 1178 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 HBE1P02100 147 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TGM4P49221 684 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SNRPGP62308 76 aaKnown RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 RNASE12Q5GAN4 147 aaKnown RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 FAM122BQ7Z309 247 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 LIX1LQ8IVB5 337 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms