RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 DEFB110Q30KQ9 67 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 FAM214AQ32MH5 1076 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 OR4N5Q8IXE1 308 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TMEFF1Q8IYR6 380 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TAGAPQ8N103 731 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TMEM52Q8NDY8 209 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 OR9Q2Q8NGE9 314 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ADAMTS15Q8TE58 950 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ANKRA2Q9H9E1 313 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 NMNAT1Q9HAN9 279 aaPredicted RBP16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PTTG2Q9NZH5 202 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 EPHA6Q9UF33 1036 aa16.87■□□□□ 0.29
HLA-DQB1-201ENST00000374943 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TLCD2A6NGC4 264 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 H3BSA7 217 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ZNF701M0R085 212 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 STK25O00506 426 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PLOD3O60568 738 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ANGPTL1O95841 491 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 EPPINO95925 133 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SH3BGRP55822 239 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 DEFB133Q30KQ1 61 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 WDR45BQ5MNZ6 344 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 C6orf132Q5T0Z8 1188 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 C16orf62Q7Z3J2 963 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 COMTD1Q86VU5 262 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CCDC71Q8IV32 467 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CNIH3Q8TBE1 160 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 COL26A1Q96A83 441 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SLC35A4Q96G79 324 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CNDP2Q96KP4 475 aaKnown RBP16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 NIPSNAP1Q9BPW8 284 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 FUZQ9BT04 418 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 POLR1BQ9H9Y6 1135 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ZNF556Q9HAH1 456 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 VCX3AQ9NNX9 186 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 STARD5Q9NSY2 213 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 RSL24D1Q9UHA3 163 aaKnown RBP16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SIT1Q9Y3P8 196 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PCDHGA6Q9Y5G7 932 aa16.86■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CCDC160A6NGH7 325 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SGK494L7N484 410 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 FAAHO00519 579 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 RDH16O75452 317 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 H1F0P07305 194 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ELAVL4P26378 380 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 GGT2P36268 569 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CSNK1EP49674 416 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 AFF3P51826 1226 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 C21orf59P57076 290 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 NDUFA9Q16795 377 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PROX2Q3B8N5 592 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 MAMSTRQ6ZN01 415 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 DEF8Q6ZN54 512 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 FAM92BQ6ZTR7 304 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 B3GNT8Q7Z7M8 397 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 LACC1Q8IV20 430 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 VANGL1Q8TAA9 524 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 NECAB3Q96P71 396 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CD180Q99467 661 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 RHCGQ9UBD6 479 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TMCC3Q9ULS5 477 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 A4GNTQ9UNA3 340 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 DNAH14Q0VDD8 3507 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TRBV4-1A0A0J9YWV2 114 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 BLACEA4D250 179 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 BCAT2O15382 392 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 AHCYL1O43865 530 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 KIF1CO43896 1103 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 LDB3O75112 727 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ADAP00813 363 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ALPPP05187 535 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CTSBP07858 339 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 HTR1AP08908 422 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 FUT4P22083 530 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TEKQ02763 1124 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CHRNEQ04844 493 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PMS2P3Q13401 168 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 INAVAQ3KP66 663 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ARHGAP11BQ3KRB8 267 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 GARNL3Q5VVW2 1013 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ZCCHC12Q6PEW1 402 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 DHRS4L2Q6PKH6 230 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 B3GNT6Q6ZMB0 384 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 OLIG3Q7RTU3 272 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 RBM45Q8IUH3 476 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 AQP11Q8NBQ7 271 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 OR9A4Q8NGU2 314 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ADAMTS18Q8TE60 1221 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 NR4A3Q92570 626 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ANKRD9Q96BM1 317 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ARHGDIGQ99819 225 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 WFDC6Q9BQY6 131 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 TRIM45Q9H8W5 580 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 ERVMER34-1Q9H9K5 563 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 PLCL2Q9UPR0 1127 aa16.85■□□□□ 0.29
HLA-DQB1-201ENST00000374943 SPTBP11277 2137 aa16.84■□□□□ 0.29
HLA-DQB1-201ENST00000374943 CACNA1EQ15878 2313 aa16.84■□□□□ 0.29
HLA-DQB1-201ENST00000374943 A0A1W2PRQ8 180 aa16.84■□□□□ 0.29
HLA-DQB1-201ENST00000374943 M0R3H8 397 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms