RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RIOK2Q9BVS4 552 aaKnown RBP10.48□□□□□ -0.73
CCDC40-203ENST00000374877 RSPO3Q9BXY4 272 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-203ENST00000374877 SPNS1Q9H2V7 528 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 TBC1D17Q9HA65 648 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 TRPV4Q9HBA0 871 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 GDE1Q9NZC3 331 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 TAAR2Q9P1P5 351 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 CKAP5Q14008 2032 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 NOTCH4Q99466 2003 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 A0A1W2PPC1 479 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 M0R3H8 397 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 RGS19P49795 217 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 TCEAL5Q5H9L2 206 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 HIST2H2AA3Q6FI13 130 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 SDE2Q6IQ49 451 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 Q6ZVU0 165 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 LIX1LQ8IVB5 337 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 FAM26EQ8N5C1 309 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 RNFT2Q96EX2 444 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 POLDIP3Q9BY77 421 aaKnown RBP10.47□□□□□ -0.73
CCDC40-203ENST00000374877 C5AR2Q9P296 337 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 SLC23A1Q9UHI7 598 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 SATB2Q9UPW6 733 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 DOCK6Q96HP0 2047 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 GOLGA4Q13439 2230 aaKnown RBP10.47□□□□□ -0.73
CCDC40-203ENST00000374877 ANHXE9PGG2 379 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 INMT-MINDY4F8WBC2 141 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 RFXAPO00287 272 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 PLOD3O60568 738 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 TRIM3O75382 744 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-203ENST00000374877 EPHX1P07099 455 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 PKLRP30613 574 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 SOX18P35713 384 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 CD79BP40259 229 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 GIPRP48546 466 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 MANFP55145 182 aaKnown RBP10.47□□□□□ -0.73
CCDC40-203ENST00000374877 PODNL1Q6PEZ8 512 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 QSOX2Q6ZRP7 698 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 METTL3Q86U44 580 aaKnown RBP10.47□□□□□ -0.73
CCDC40-203ENST00000374877 LHFPL3Q86UP9 236 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 IQCHQ86VS3 1027 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 SLC30A8Q8IWU4 369 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-203ENST00000374877 VOPP1Q96AW1 172 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 LMLNQ96KR4 655 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 HDHD2Q9H0R4 259 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 PPP1R3EQ9H7J1 279 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 SLC28A2O43868 658 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 MMP11P24347 488 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 CTBP2P56545 445 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 CLDN20P56880 219 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 ADAM15Q13444 863 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 KLHL22Q53GT1 634 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 RNLSQ5VYX0 342 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 LAMTOR1Q6IAA8 161 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 UNC5DQ6UXZ4 953 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 CREB3L2Q70SY1 520 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 TIGD4Q8IY51 512 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 C2orf73Q8N5S3 287 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-203ENST00000374877 ING5Q8WYH8 240 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 IRF7Q92985 503 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 MED18Q9BUE0 208 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 FNDC11Q9BVV2 318 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 GTPBP2Q9BX10 602 aaKnown RBP10.47□□□□□ -0.73
CCDC40-203ENST00000374877 TESQ9UGI8 421 aaKnown RBP10.47□□□□□ -0.73
CCDC40-203ENST00000374877 CLCA2Q9UQC9 943 aa10.47□□□□□ -0.73
CCDC40-203ENST00000374877 ATG13O75143 517 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 C1GALT1C1LP0DN25 315 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 NPPBP16860 134 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 ABATP80404 500 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 LRRC32Q14392 662 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 POM121L1PQ3SYA9 428 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 OLIG3Q7RTU3 272 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 MARCH9Q86YJ5 346 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 RASGRP3Q8IV61 690 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 RASGEF1AQ8N9B8 481 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 DTX3Q8N9I9 347 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 DUSP18Q8NEJ0 188 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 OR4K5Q8NGD3 323 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 TMEM163Q8TC26 289 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 MYLIPQ8WY64 445 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 EFCAB11Q9BUY7 163 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF576Q9H609 170 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 IGFLR1Q9H665 355 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 SF3B6Q9Y3B4 125 aaKnown RBP10.46□□□□□ -0.73
CCDC40-203ENST00000374877 PCDHGB7Q9Y5F8 929 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 RTCAO00442 366 aaKnown RBP10.46□□□□□ -0.73
CCDC40-203ENST00000374877 STK25O00506 426 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 NPC1O15118 1278 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 KLHL18O94889 574 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 TP53P04637 393 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-203ENST00000374877 INSL4Q14641 139 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 C3orf38Q5JPI3 329 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 ZER1Q7Z7L7 766 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 AKAP1Q92667 903 aaKnown RBP eCLIP10.46□□□□□ -0.73
CCDC40-203ENST00000374877 SMARCD2Q92925 531 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 OMA1Q96E52 524 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 ZC3HAV1LQ96H79 300 aaKnown RBP10.46□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF354BQ96LW1 612 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 ASB16Q96NS5 453 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms