RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 TRIOBPQ9H2D6 2365 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 CASC3O15234 703 aaKnown RBP16.78■□□□□ 0.28
CTSA-204ENST00000372484 CHMP24386 653 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 POU1F1P28069 291 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 CTSKP43235 329 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 MASP1P48740 699 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 CRISP1P54107 249 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 VSX2P58304 361 aaPredicted RBP16.78■□□□□ 0.28
CTSA-204ENST00000372484 CDC42P60953 191 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 LEXMQ3ZCV2 418 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 MANEAQ5SRI9 462 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 TMEM236Q5W0B7 351 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 RBM12BQ8IXT5 1001 aaKnown RBP16.78■□□□□ 0.28
CTSA-204ENST00000372484 NLGN4XQ8N0W4 816 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 CSNK1A1LQ8N752 337 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 FAM174AQ8TBP5 190 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 SLC7A13Q8TCU3 470 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 MS4A4EQ96PG1 132 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 TRNT1Q96Q11 434 aaKnown RBP16.78■□□□□ 0.28
CTSA-204ENST00000372484 COPS4Q9BT78 406 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 FNDC11Q9BVV2 318 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 PINK1Q9BXM7 581 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 SLC38A1Q9H2H9 487 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 PRDM9Q9NQV7 894 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 DNAAF2Q9NVR5 837 aaKnown RBP16.78■□□□□ 0.28
CTSA-204ENST00000372484 ZNF226Q9NYT6 803 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 CALML5Q9NZT1 146 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 DUSP12Q9UNI6 340 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 MGAT4BQ9UQ53 548 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 SPACA6W5XKT8 324 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 DUXAA6NLW8 204 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 TPST2O60704 377 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 CDK4P11802 303 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 CPMP14384 443 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 CHRNEQ04844 493 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 NFATC3Q12968 1075 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 UBXN2BQ14CS0 331 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 ZNF311Q5JNZ3 666 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 FAM92BQ6ZTR7 304 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 USP53Q70EK8 1073 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 FKBP10Q96AY3 582 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 UCK2Q9BZX2 261 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 GPN2Q9H9Y4 310 aaPredicted RBP16.78■□□□□ 0.28
CTSA-204ENST00000372484 AMBNQ9NP70 447 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 PLCXD1Q9NUJ7 323 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 GIN1Q9NXP7 522 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 NTMQ9P121 344 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 FTSJ1Q9UET6 329 aa16.78■□□□□ 0.28
CTSA-204ENST00000372484 A0A1W2PRQ8 180 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 ZAR1LA6NP61 321 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 M0R129 80 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 ALPPP05187 535 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 PORP16435 677 aaPredicted RBP16.77■□□□□ 0.28
CTSA-204ENST00000372484 HPCAP84074 193 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 ID2Q02363 134 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 MVKQ03426 396 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 DGCR6Q14129 220 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 SMAD2Q15796 467 aaKnown RBP16.77■□□□□ 0.28
CTSA-204ENST00000372484 MFSD12Q6NUT3 480 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 SLC16A11Q8NCK7 471 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 ZG16BQ96DA0 208 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 SLC35A4Q96G79 324 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 ACOT13Q9NPJ3 140 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 STARD5Q9NSY2 213 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 PSORS1C1Q9UIG5 152 aa16.77■□□□□ 0.28
CTSA-204ENST00000372484 TMEM265A0A087WTH1 108 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 SH3PXD2BA1X283 911 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 LDB3O75112 727 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 ZBTB11O95625 1053 aaPredicted RBP16.76■□□□□ 0.27
CTSA-204ENST00000372484 ST6GAL1P15907 406 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 ZNF182P17025 639 aaPredicted RBP16.76■□□□□ 0.27
CTSA-204ENST00000372484 GABRB1P18505 474 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 UGT2B15P54855 530 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 FAM214AQ32MH5 1076 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 MLIPQ5VWP3 458 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 OR2L13Q8N349 312 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 DNAJC22Q8N4W6 341 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 OR5T3Q8NGG3 340 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 SLC9A6Q92581 669 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 SIGLEC11Q96RL6 698 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 FUZQ9BT04 418 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 PRO3102Q9H379 93 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 SEMA6CQ9H3T2 930 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 ENPP5Q9UJA9 477 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 SLC13A4Q9UKG4 626 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 POMT2Q9UKY4 750 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 DSPPQ9NZW4 1301 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 CLCA1A8K7I4 914 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 OSMP13725 252 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 NR4A1P22736 598 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 PSMB9P28065 219 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 NUDT6P53370 316 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 SHC2P98077 582 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 TARDBPQ13148 414 aaKnown RBP eCLIP16.76■□□□□ 0.27
CTSA-204ENST00000372484 CDC73Q6P1J9 531 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 PGBD2Q6P3X8 592 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 PODNL1Q6PEZ8 512 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 DHRS4L2Q6PKH6 230 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 SLC16A12Q6ZSM3 486 aa16.76■□□□□ 0.27
CTSA-204ENST00000372484 ANKRD13BQ86YJ7 626 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms