RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SFT2D3Q587I9 215 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 MLIPQ5VWP3 458 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZMIZ2Q8NF64 920 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 TTLQ8NG68 377 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 FZD3Q9NPG1 666 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 PRDM9Q9NQV7 894 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 LRRTM2O43300 516 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 FMO6PO60774 539 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 LEFTY1O75610 366 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 IFNGR1P15260 489 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 RPL10P27635 214 aaKnown RBP13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 VSX2P58304 361 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 PLGLB1Q02325 96 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 TMEM145Q8NBT3 493 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 CASD1Q96PB1 797 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 PKP2Q99959 881 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 CNTNAP3Q9BZ76 1288 aa13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 AJAP1Q9UKB5 411 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZNF207O43670 478 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 POP7O75817 140 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 CNTN5O94779 1100 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 ITGBL1O95965 494 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 MGST1P10620 155 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 NTSR1P30989 418 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 KHKP50053 298 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 PLA2G16P53816 162 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZNF805Q5CZA5 627 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZNF783Q6ZMS7 281 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 TIPARPQ7Z3E1 657 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 FOXJ1Q92949 421 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 RDH12Q96NR8 316 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 LMAN1LQ9HAT1 526 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 NUBP2Q9Y5Y2 271 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 ETV3P41162 512 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 GRB2P62993 217 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 RNF212Q495C1 297 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 OR2T5Q6IEZ7 315 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 OR2T29Q8NH02 315 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 NEIL3Q8TAT5 605 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZDHHC1Q8WTX9 485 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 OR1E3Q8WZA6 343 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 RAB7BQ96AH8 199 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 TPSD1Q9BZJ3 242 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZNF576Q9H609 170 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 KIF25Q9UIL4 384 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 GRXCR1A8MXD5 290 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 CCKBRP32239 447 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 NTHL1P78549 312 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 TRAM2Q15035 370 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 ESCO2Q56NI9 601 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 SLC36A4Q6YBV0 504 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 SLC15A4Q8N697 577 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 BOLLQ8N9W6 283 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 CHDHQ8NE62 594 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 OR52H1Q8NGJ2 320 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 RSPRY1Q96DX4 576 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 C12orf57Q99622 126 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 USP36Q9P275 1121 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 IRF9Q00978 393 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZNF169Q14929 603 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 ERMP1Q7Z2K6 904 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 CANT1Q8WVQ1 401 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 GPR34Q9UPC5 381 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 FAM96BQ9Y3D0 163 aa13.42□□□□□ -0.26
RAPGEF1-202ENST00000372190 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 FAM234BA2RU67 622 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 SMIM30A4D0T7 59 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 ATG12O94817 140 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 SLC18A1P54219 525 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 FBXO48Q5FWF7 155 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 KIAA1614Q5VZ46 1190 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 KIAA0930Q6ICG6 404 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 DNM1P34Q6PK57 102 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 OR4E2Q8NGC2 313 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 SLC13A3Q8WWT9 602 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 SLCO2A1Q92959 643 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 SERTAD3Q9UJW9 196 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 IGKV6-21A0A0C4DH24 114 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 KIAA1324LA8MWY0 1029 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 H0YAE9 185 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 PRAMEF11O60813 436 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 MTPNP58546 118 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 ARHGAP40Q5TG30 622 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 FAM122BQ7Z309 247 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 ADIPOR2Q86V24 386 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 IQCHQ86VS3 1027 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 SLC39A11Q8N1S5 342 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZNF561Q8N587 486 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZSCAN4Q8NAM6 433 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 NPRL2Q8WTW4 380 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 CDK15Q96Q40 435 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 NELL2Q99435 816 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 SLC6A17Q9H1V8 727 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 A0A0D9SEW6 157 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 WASHC1A8K0Z3 465 aa13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 GANABQ14697 944 aaKnown RBP13.41□□□□□ -0.26
RAPGEF1-202ENST00000372190 LPAL2Q16609 132 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms