RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DOC2BQ14184 412 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 GPR18Q14330 331 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 SNAPC1Q16533 368 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 RGS21Q2M5E4 152 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 FAM111BQ6SJ93 734 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 SMARCD3Q6STE5 483 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 Q6ZSR6 202 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 UBE2Q1Q7Z7E8 422 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 PARGQ86W56 976 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 ART5Q96L15 291 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 DSN1Q9H410 356 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 CCNB1IP1Q9NPC3 277 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 ZNF229Q9UJW7 825 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 SLCO1B1Q9Y6L6 691 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 P2RX6O15547 441 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 TBX1O43435 398 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 GKN3PP0CG01 181 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 BMP4P12644 408 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 FUT1P19526 365 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 MAOBP27338 520 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 GTF2E2P29084 291 aaKnown RBP11.06□□□□□ -0.64
PDE6C-201ENST00000371447 MPIP34949 423 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 GPR4P46093 362 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 PCDH1Q08174 1060 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 TGM3Q08188 693 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 HYAL2Q12891 473 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 GINS1Q14691 196 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 FIGNL1Q6PIW4 674 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 TAF8Q7Z7C8 310 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 DEPDC4Q8N2C3 294 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 TBC1D19Q8N5T2 526 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 OR2L5Q8NG80 312 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 CDS1Q92903 461 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 CLIP3Q96DZ5 547 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 BMFQ96LC9 184 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 SLC17A4Q9Y2C5 497 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 SLC9A8Q9Y2E8 581 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 PLRG1O43660 514 aaKnown RBP11.06□□□□□ -0.64
PDE6C-201ENST00000371447 GABARAPO95166 117 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 CDK1P06493 297 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 CBLP22681 906 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 KCNJ5P48544 419 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 TPMTP51580 245 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 PUS10Q3MIT2 529 aaKnown RBP11.06□□□□□ -0.64
PDE6C-201ENST00000371447 TRMT12Q53H54 448 aaKnown RBP11.06□□□□□ -0.64
PDE6C-201ENST00000371447 KIAA1161Q6NSJ0 714 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 ZNF730Q6ZMV8 503 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 CCDC80Q76M96 950 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 SUN3Q8TAQ9 357 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 FAM46AQ96IP4 442 aaKnown RBP11.06□□□□□ -0.64
PDE6C-201ENST00000371447 ZNF354BQ96LW1 612 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 GABARAPL3Q9BY60 117 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 ANKMY1Q9P2S6 941 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 ASB4Q9Y574 426 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 CENPVL1A0A0U1RR11 272 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 NT5EP21589 574 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 MMP11P24347 488 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 ATP6V1E1P36543 226 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 VASPP50552 380 aaPredicted RBP11.05□□□□□ -0.64
PDE6C-201ENST00000371447 SLC16A1P53985 500 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 ERV3-1Q14264 604 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 EXOSC7Q15024 291 aaKnown RBP11.05□□□□□ -0.64
PDE6C-201ENST00000371447 SYT6Q5T7P8 510 aaPredicted RBP11.05□□□□□ -0.64
PDE6C-201ENST00000371447 ZER1Q7Z7L7 766 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 OR13H1Q8NG92 308 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 PIK3R3Q92569 461 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 SLC38A4Q969I6 547 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 YIPF6Q96EC8 236 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 OR7D2Q96RA2 312 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 MGLLQ99685 303 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 IL21RQ9HBE5 538 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 DZANK1Q9NVP4 752 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 HRASLS2Q9NWW9 162 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 N6AMT1Q9Y5N5 214 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 ASXL3Q9C0F0 2248 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 CACNA1CQ13936 2221 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 B4DGG1 531 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 SLC35G6P0C7Q6 338 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 NR2F6P10588 404 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 ALOX12P18054 663 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 PDX1P52945 283 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 VSX2P58304 361 aaPredicted RBP11.05□□□□□ -0.64
PDE6C-201ENST00000371447 CCDC92Q53HC0 331 aaPredicted RBP11.05□□□□□ -0.64
PDE6C-201ENST00000371447 ACSM5Q6NUN0 579 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 VN1R4Q7Z5H5 301 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 GHDCQ8N2G8 530 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 FAM46DQ8NEK8 389 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 OR7G2Q8NG99 324 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 MRPL38Q96DV4 380 aaKnown RBP11.05□□□□□ -0.64
PDE6C-201ENST00000371447 LRR1Q96L50 414 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 PITX2Q99697 317 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 PLA2G12AQ9BZM1 189 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 HMG20AQ9NP66 347 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 THSD1Q9NS62 852 aa11.05□□□□□ -0.64
PDE6C-201ENST00000371447 SLC22A1O15245 554 aa11.04□□□□□ -0.64
PDE6C-201ENST00000371447 HCRTR1O43613 425 aa11.04□□□□□ -0.64
PDE6C-201ENST00000371447 PRKYO43930 277 aa11.04□□□□□ -0.64
PDE6C-201ENST00000371447 GMFGO60234 142 aa11.04□□□□□ -0.64
PDE6C-201ENST00000371447 PDE9AO76083 593 aa11.04□□□□□ -0.64
PDE6C-201ENST00000371447 AZGP1P25311 298 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms