RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ABCG4Q9H172 646 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 MYNNQ9NPC7 610 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 TAS2R8Q9NYW2 309 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 KCNN3Q9UGI6 736 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 MYH1P12882 1939 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 MYH4Q9Y623 1939 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 SOX1O00570 391 aaPredicted RBP16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 RNF13O43567 381 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 SOD2P04179 222 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 ALDH3B2P48448 385 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 CRYZQ08257 329 aaKnown RBP16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 NHSL2Q5HYW2 709 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 TRNP1Q6NT89 227 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 OR7G3Q8NG95 312 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 VNN3Q9NY84 501 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 TIAM2Q8IVF5 1701 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 WASH3PC4AMC7 463 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 CTDSP2O14595 271 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 CA12O43570 354 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 UGDHO60701 494 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 EIF2S3P41091 472 aaKnown RBP16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 GLP1RP43220 463 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 CRHR2Q13324 411 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 RPS26P11Q5JNZ5 115 aaPredicted RBP16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 SPIN3Q5JUX0 258 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 ACPTQ9BZG2 426 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 PAK4O96013 591 aaPredicted RBP16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 BMP4P12644 408 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 NR2C1P13056 603 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 RGS19P49795 217 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 RAB5BP61020 215 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 LRRC25Q8N386 305 aaPredicted RBP16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 WDR20Q8TBZ3 569 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 GAL3ST3Q96A11 431 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 IL26Q9NPH9 171 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 EDARQ9UNE0 448 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 DHDHQ9UQ10 334 aa16.3■□□□□ 0.2
PTP4A1-201ENST00000370651 BORCS7-ASMTA0A0B4J1R7 106 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 CLUP10909 449 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 PRKACBP22694 351 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 PCSK6P29122 969 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 MAGEA3P43357 314 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 GATMP50440 423 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 RNF144AP50876 292 aaPredicted RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 SCD5Q86SK9 330 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 TMEM40Q8WWA1 233 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 NTMT1Q9BV86 223 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 GON7Q9BXV9 100 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 TEX10Q9NXF1 929 aaPredicted RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 GMPR2Q9P2T1 348 aaKnown RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 IL20RAQ9UHF4 553 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 PCDHA9Q9Y5H5 950 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 CACNG2Q9Y698 323 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 DNMT3AQ9Y6K1 912 aaPredicted RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 MEIS3P2A8K0S8 358 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 SFTPBP07988 381 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 MLLT3P42568 568 aaPredicted RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 CDKN2CP42773 168 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 GPR143P51810 404 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 SELPLGQ14242 412 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 CDNFQ49AH0 187 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 CATSPEREQ5SY80 951 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 AGAP7PQ5VUJ5 663 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 ALKBH2Q6NS38 261 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 CBLL1Q75N03 491 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 SERINC5Q86VE9 423 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 CNOT9Q92600 299 aaKnown RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 S100PBPQ96BU1 408 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 SGTBQ96EQ0 304 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 SRA1Q9HD15 236 aaKnown RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 NUBP2Q9Y5Y2 271 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 COL14A1Q05707 1796 aaKnown RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 FEZF1A0PJY2 475 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 A8MU76 341 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 B4DGG1 531 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 M0R3H8 397 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 RNASET2O00584 256 aaKnown RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 GPR19Q15760 415 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 RDH14Q9HBH5 336 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 THSD1Q9NS62 852 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 RXFP3Q9NSD7 469 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 SLCO3A1Q9UIG8 710 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 TFP02787 698 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 HRH2P25021 359 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 TMEM35AQ53FP2 167 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 ZNF776Q68DI1 518 aaPredicted RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 DUS1LQ6P1R4 473 aaKnown RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 ASPGQ86U10 573 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 LRRTM3Q86VH5 581 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 GGHQ92820 318 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 MKRN2Q9H000 416 aaKnown RBP16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 OR51J1Q9H342 316 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 CLMPQ9H6B4 373 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 ACTL7AQ9Y615 435 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 AP1M2Q9Y6Q5 423 aa16.29■□□□□ 0.2
PTP4A1-201ENST00000370651 LOC105369274A0A096LPK9 316 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 VEGFDO43915 354 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 GNSP15586 552 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 PPP2R2DQ66LE6 453 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms