RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 HRASLS2Q9NWW9 162 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 FAM120CQ9NX05 1096 aaKnown RBP10.06□□□□□ -0.8
TPM3-212ENST00000368533 MAP4K5Q9Y4K4 846 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 THADAQ6YHU6 1953 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 PCDH15Q96QU1 1955 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 LOC105369274A0A096LPK9 316 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 LOC102723532A0A0G2JNH3 316 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 SLC22A1O15245 554 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 LCKP06239 509 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 ERGP11308 486 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 POU2F1P14859 743 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 ATF4P18848 351 aaPredicted RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 CERS1P27544 350 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 HBA1P69905 142 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 HHEXQ03014 270 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 LPAL2Q16609 132 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 OLIG3Q7RTU3 272 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 NRARPQ7Z6K4 114 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 PTOV1Q86YD1 416 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 OR4N4Q8N0Y3 316 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 PARP16Q8N5Y8 322 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 OR52E4Q8NGH9 312 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 PPCDCQ96CD2 204 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 MS4A8Q9BY19 250 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 SLC6A16Q9GZN6 736 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 LHX9Q9NQ69 397 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 TMEM74BQ9NUR3 256 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 PCDHGA10Q9Y5H3 936 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 SNTNA6NMZ2 147 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 CTSVO60911 334 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 SEMA3DO95025 777 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 ACPPP15309 386 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 PRKACAP17612 351 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 PTX3P26022 381 aaPredicted RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 TEAD1P28347 426 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 GRK3P35626 688 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 RGS19P49795 217 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 IL18R1Q13478 541 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 TOR1AIP1Q5JTV8 583 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 COX20Q5RI15 118 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 FRMPD2BQ6IN97 320 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 EIF3MQ7L2H7 374 aaKnown RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 SVOPQ8N4V2 548 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 ZDHHC1Q8WTX9 485 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 C11orf24Q96F05 449 aaPredicted RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 SCARF2Q96GP6 870 aaPredicted RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 SNX18Q96RF0 628 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 DCSTAMPQ9H295 470 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 MVB12BQ9H7P6 319 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 EVA1BQ9NVM1 165 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 ARID1BQ8NFD5 2236 aaPredicted RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 A0A1W2PPC1 479 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 PRR19A6NJB7 356 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 AKR7A2O43488 359 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 GPX2P18283 190 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 CD38P28907 300 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 CHI3L1P36222 383 aaPredicted RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 MASP1P48740 699 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 NUDT6P53370 316 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 REEP5Q00765 189 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 ALDH6A1Q02252 535 aaKnown RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 ID2Q02363 134 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 NPRL3Q12980 569 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 ARHGAP19Q14CB8 494 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 NKAIN2Q5VXU1 208 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 LAIR1Q6GTX8 287 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 PRSS41Q7RTY9 318 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 UBE3DQ7Z6J8 389 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 PARGQ86W56 976 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 ZNF300Q96RE9 604 aaPredicted RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 ROGDIQ9GZN7 287 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 SIRT5Q9NXA8 310 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 WNT16Q9UBV4 365 aa10.05□□□□□ -0.8
TPM3-212ENST00000368533 NUFIP1Q9UHK0 495 aaKnown RBP10.05□□□□□ -0.8
TPM3-212ENST00000368533 LOC100506127A0A0U1RQW1 187 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 CHURC1-FNTBB4DL54 471 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 TNFRSF11BO00300 401 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 POLR1CO15160 346 aaPredicted RBP10.04□□□□□ -0.8
TPM3-212ENST00000368533 SCN2BO60939 215 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 ITGAMP11215 1152 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 ETFAP13804 333 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 UGT2B7P16662 529 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 CXCL12P48061 93 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 FNTBP49356 437 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 PRKAG1P54619 331 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 CDH12P55289 794 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 C18orf63Q68DL7 685 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 KDM4DQ6B0I6 523 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 RNF165Q6ZSG1 346 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 FAM92BQ6ZTR7 304 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 OR4N5Q8IXE1 308 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 KLHDC8AQ8IYD2 350 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 FAM109AQ8N4B1 249 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 C11orf65Q8NCR3 313 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 PCNPQ8WW12 178 aaKnown RBP10.04□□□□□ -0.8
TPM3-212ENST00000368533 RBCK1Q9BYM8 510 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 MMP28Q9H239 520 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 SLAMF7Q9NQ25 335 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 TEKT2Q9UIF3 430 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 TECTAO75443 2155 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms