RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 S100A16Q96FQ6 103 aaKnown RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 NODALQ96S42 347 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 PIP5K1AQ99755 562 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF251Q9BRH9 671 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 DPH7Q9BTV6 452 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ACTR6Q9GZN1 396 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 AMBNQ9NP70 447 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 TMEM248Q9NWD8 314 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 TMEM184BQ9Y519 407 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ITGB4P16144 1822 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 CBY3A6NI87 242 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 CD6P30203 668 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 GABRA2P47869 451 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 CSNK1EP49674 416 aaKnown RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 QPCTQ16769 361 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF423Q2M1K9 1284 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 SLC35G1Q2M3R5 365 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 C18orf21Q32NC0 220 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ACSBG2Q5FVE4 666 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 UBE2UQ5VVX9 321 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF585AQ6P3V2 769 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 HACD2Q6Y1H2 254 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 TICAM1Q8IUC6 712 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 UEVLDQ8IX04 471 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 BSCL2Q96G97 398 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 TCEAL2Q9H3H9 227 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 CWH43Q9H720 699 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 SRA1Q9HD15 236 aaKnown RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ATRNO75882 1429 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ALOX15BO15296 676 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ABCB7O75027 752 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 RAB36O95755 333 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 HNRNPA1P09651 372 aaKnown RBP eCLIP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF865P0CJ78 1059 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ADORA3P0DMS8 318 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 PTDSS1P48651 473 aaKnown RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 SNX29P2Q8IUI4 249 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 OR10R2Q8NGX6 335 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 FGF13Q92913 245 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 C12orf42Q96LP6 360 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 FOXN4Q96NZ1 517 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 RBM24Q9BX46 236 aaKnown RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 AKTIPQ9H8T0 292 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ITM2CQ9NQX7 267 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 CDH22Q9UJ99 828 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 SHISA7A6NL88 538 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 CXorf49A8MYA2 514 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 TOR1BO14657 336 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 HYAL4Q2M3T9 481 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 RALGPS1Q5JS13 557 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 KDELC1Q6UW63 502 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 CD163Q86VB7 1156 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 NRROSQ86YC3 692 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 CREB3L4Q8TEY5 395 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 PGAM5Q96HS1 289 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 ZBED3Q96IU2 234 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 OXSMQ9NWU1 459 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 CXXC1Q9P0U4 656 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-201ENST00000368147 DLGAP4Q9Y2H0 992 aa6.75□□□□□ -1.33
SPTA1-201ENST00000368147 SALL3Q9BXA9 1300 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 DPPA5A6NC42 116 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 A6NHS1 94 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 LPLP06858 475 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 SRPRAP08240 638 aaKnown RBP6.74□□□□□ -1.33
SPTA1-201ENST00000368147 METTL15P1P0C7V9 234 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 CAPN3P20807 821 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 SOX2P48431 317 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 TBPL1P62380 186 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 PIAS4Q8N2W9 510 aaPredicted RBP6.74□□□□□ -1.33
SPTA1-201ENST00000368147 GLYATL1Q969I3 302 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 CD180Q99467 661 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 POLR2J3Q9H1A7 115 aaKnown RBP6.74□□□□□ -1.33
SPTA1-201ENST00000368147 GPN2Q9H9Y4 310 aaPredicted RBP6.74□□□□□ -1.33
SPTA1-201ENST00000368147 SLC7A11Q9UPY5 501 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 MGAT4BQ9UQ53 548 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 STC2O76061 302 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 PROS1P07225 676 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 CBSLP0DN79 551 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 CERS1P27544 350 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 APLNRP35414 380 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 CBSP35520 551 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 LEPRP48357 1165 aaKnown RBP6.74□□□□□ -1.33
SPTA1-201ENST00000368147 IRF5Q13568 498 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF169Q14929 603 aaPredicted RBP6.74□□□□□ -1.33
SPTA1-201ENST00000368147 GRIN2CQ14957 1233 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 TAF9Q16594 264 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 IQCCQ4KMZ1 466 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 LRFN4Q6PJG9 635 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 BAIAP2L2Q6UXY1 529 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 FAM217AQ8IXS0 508 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 FBXL16Q8N461 479 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 DAZLQ92904 295 aaKnown RBP6.74□□□□□ -1.33
SPTA1-201ENST00000368147 LRFN5Q96NI6 719 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 F2RL3Q96RI0 385 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 PAPOLGQ9BWT3 736 aaKnown RBP6.74□□□□□ -1.33
SPTA1-201ENST00000368147 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.74□□□□□ -1.33
SPTA1-201ENST00000368147 QPCTLQ9NXS2 382 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 G3V3Y1 287 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 FAM72CH0Y354 149 aa6.74□□□□□ -1.33
SPTA1-201ENST00000368147 ADAMDEC1O15204 470 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms