RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MAP4K5Q9Y4K4 846 aa11.32□□□□□ -0.6
USF1-203ENST00000368021 COL5A1P20908 1838 aaPredicted RBP11.31□□□□□ -0.6
USF1-203ENST00000368021 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 A8MU76 341 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 PLOD2O00469 737 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 B4GALT2O60909 372 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 OXSR1O95747 527 aaPredicted RBP11.31□□□□□ -0.6
USF1-203ENST00000368021 ATP1B1P05026 303 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 GP1BAP07359 652 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 NUDT7P0C024 238 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 FCGR1AP12314 374 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 M6PRP20645 277 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 PRIM2P49643 509 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 ARSFP54793 590 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 DSTNP60981 165 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 ACY1Q03154 408 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 FOLH1Q04609 750 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 RGS21Q2M5E4 152 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 ZNF750Q32MQ0 723 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 FAM98BQ52LJ0 330 aaKnown RBP11.31□□□□□ -0.6
USF1-203ENST00000368021 TBCELQ5QJ74 424 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 INTS11Q5TA45 600 aaKnown RBP11.31□□□□□ -0.6
USF1-203ENST00000368021 CEACAM20Q6UY09 585 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 LINC00299Q6ZSB3 139 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 MED25Q71SY5 747 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 ZNF595Q8IYB9 648 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 LILRA2Q8N149 483 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 TMEM52Q8NDY8 209 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 OR1L3Q8NH93 324 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 ADAMTS14Q8WXS8 1223 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 ELP4Q96EB1 424 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 UGT2B28Q9BY64 529 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 C3orf14Q9HBI5 128 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 FGF21Q9NSA1 209 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 ZCCHC3Q9NUD5 404 aaKnown RBP11.31□□□□□ -0.6
USF1-203ENST00000368021 SELENONQ9NZV5 590 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 KLK13Q9UKR3 277 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 SAMD4AQ9UPU9 718 aaKnown RBP11.31□□□□□ -0.6
USF1-203ENST00000368021 IFT52Q9Y366 437 aa11.31□□□□□ -0.6
USF1-203ENST00000368021 A0A1W2PS29 197 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 NTN3O00634 580 aaPredicted RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 EMC8O43402 210 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 FGF17O60258 216 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 CAPNS1P04632 268 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 RAP2AP10114 183 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 ARAFP10398 606 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 KDELR2P33947 212 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 GSSP48637 474 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 ANXA11P50995 505 aaKnown RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 ESRRGP62508 458 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 EEF1A2Q05639 463 aaKnown RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 TP53BP2Q13625 1128 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 ELOAQ14241 798 aaKnown RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 C16orf72Q14CZ0 275 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 SMUG1Q53HV7 270 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 BPHLQ86WA6 291 aaPredicted RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 TMEM102Q8N9M5 508 aaPredicted RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 OR9A2Q8NGT5 310 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 MAL2Q969L2 176 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 MMABQ96EY8 250 aaPredicted RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 PKP2Q99959 881 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 ASPSCR1Q9BZE9 553 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 MAGIXQ9H6Y5 334 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 FKBP14Q9NWM8 211 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 PTGFRNQ9P2B2 879 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 RPS6KA6Q9UK32 745 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 ZNF451Q9Y4E5 1061 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 PCDHGA1Q9Y5H4 931 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 FAM227AF5H4B4 570 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 AGRPO00253 132 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 CLDN4O14493 209 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 ZNF749O43361 778 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 LDB3O75112 727 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 BMP10O95393 424 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 SERPINA1P01009 418 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 TFAP2AP05549 437 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 SMIM18P0DKX4 95 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 ZNF23P17027 643 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 CDH2P19022 906 aaPredicted RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 MC3RP41968 323 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 CDK6Q00534 326 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 INSM1Q01101 510 aaPredicted RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 CHRNB3Q05901 458 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 APOFQ13790 326 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 SCARB2Q14108 478 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 TRIP10Q15642 601 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 HES3Q5TGS1 186 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 TMEM107Q6UX40 140 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 KBTBD2Q8IY47 623 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 METTL25Q8N6Q8 603 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 HORMAD2Q8N7B1 307 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 ZNF420Q8TAQ5 688 aaPredicted RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 ZNF675Q8TD23 568 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 ANKRD9Q96BM1 317 aaPredicted RBP11.3□□□□□ -0.6
USF1-203ENST00000368021 SLC35G5Q96KT7 338 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 RNF145Q96MT1 663 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 GFM1Q96RP9 751 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms