RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 LPAR4Q99677 370 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 SEMA3CQ99985 751 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 CDC42EP4Q9H3Q1 356 aaKnown RBP4.68□□□□□ -1.66
RC3H1-202ENST00000367694 TPT1P8Q9HAU6 139 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 CCNB1IP1Q9NPC3 277 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 ABCB10Q9NRK6 738 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 SPG21Q9NZD8 308 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 CXXC1Q9P0U4 656 aaPredicted RBP4.68□□□□□ -1.66
RC3H1-202ENST00000367694 TMEM181Q9P2C4 612 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 CHRNA9Q9UGM1 479 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 ARMCX3Q9UH62 379 aaPredicted RBP4.68□□□□□ -1.66
RC3H1-202ENST00000367694 ZNRF3Q9ULT6 936 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 ZNF337Q9Y3M9 751 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 PCDHA11Q9Y5I1 949 aa4.68□□□□□ -1.66
RC3H1-202ENST00000367694 A0A075B6Q4 140 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 PTGES3LE9PB15 166 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 EREGO14944 169 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 SCAMP2O15127 329 aaKnown RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 LCMT2O60294 686 aaKnown RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 SUPT7LO94864 414 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 CALCAP01258 141 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 F13BP05160 661 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 MPOP05164 745 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 TMEM191BP0C7N4 346 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 PLS3P13797 630 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 NQO2P16083 231 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 SCGB2A2Q13296 93 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 CAPSQ13938 189 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 DUOXA1Q1HG43 343 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 MPPE1Q53F39 396 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 ZRANB3Q5FWF4 1079 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 PRAMEF13Q5VWM6 474 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 DENND1BQ6P3S1 775 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 TRAT1Q6PIZ9 186 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 VHLLQ6RSH7 139 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 TMEM107Q6UX40 140 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 RNF165Q6ZSG1 346 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 GRINAQ7Z429 371 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 LYG2Q86SG7 212 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 TMEM135Q86UB9 458 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 LDLRAD3Q86YD5 345 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 OR2C3Q8N628 320 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 HSD17B11Q8NBQ5 300 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 SEMA6DQ8NFY4 1073 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 EEF2KMTQ96G04 330 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 LCORQ96JN0 433 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 C3orf30Q96M34 536 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 WDFY2Q96P53 400 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 RNF2Q99496 336 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 ELOVL6Q9H5J4 265 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 NSUN3Q9H649 340 aaKnown RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 BARX1Q9HBU1 254 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 MIEF1Q9NQG6 463 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 KRT84Q9NSB2 600 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 VNN3Q9NY84 501 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 PLEKHA6Q9Y2H5 1048 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 PCDHB11Q9Y5F2 797 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 WDR81Q562E7 1941 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 CICQ96RK0 1608 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 TRBC2A0A5B9 178 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 USP17L3A6NCW0 530 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 C1QTNF3-AMACRE9PGA6 284 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 DNAJB6O75190 326 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 POU3F2P20265 443 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 NPR2P20594 1047 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 AKT1P31749 480 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 RPL21P46778 160 aaKnown RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 CXCR3P49682 368 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 PDLIM4P50479 330 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 IL18R1Q13478 541 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 HLXQ14774 488 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 MEP1AQ16819 746 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 GAB4Q2WGN9 574 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 GLRA4Q5JXX5 417 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 SLC35F1Q5T1Q4 408 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 PAQR3Q6TCH7 311 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 UQCC3Q6UW78 93 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 GPR149Q86SP6 731 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 UNC93AQ86WB7 457 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 SFRP1Q8N474 314 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 SLC35G2Q8TBE7 412 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 STK35Q8TDR2 534 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 CACNG8Q8WXS5 425 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 CDS1Q92903 461 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 DVL3Q92997 716 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 SLCO4A1Q96BD0 722 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 CNTNAP3BQ96NU0 1288 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 AMDHD1Q96NU7 426 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 HHIPQ96QV1 700 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 JAM3Q9BX67 310 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 SNHG12Q9BXW3 62 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 CNTNAP3Q9BZ76 1288 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 MAGEB5Q9BZ81 275 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 PPIL3Q9H2H8 161 aaKnown RBP4.67□□□□□ -1.66
RC3H1-202ENST00000367694 FN3KQ9H479 309 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 REEP4Q9H6H4 257 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 LRP2BPQ9P2M1 347 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 THSD7AQ9UPZ6 1657 aa4.67□□□□□ -1.66
RC3H1-202ENST00000367694 FABP12A6NFH5 140 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms