RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 NECTIN3Q9NQS3 549 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 ZIM2Q9NZV7 527 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 CCDC167Q9P0B6 97 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 ATP6V1HQ9UI12 483 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 UTS2RQ9UKP6 389 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 CES1P1Q9UKY3 287 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 MKL2Q9ULH7 1088 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 CDC14AQ9UNH5 594 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 TRIM33Q9UPN9 1127 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 TLN2Q9Y4G6 2542 aa7.6□□□□□ -1.19
MRPL55-211ENST00000366738 IGKV3D-11A0A0A0MRZ8 115 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 TRAV17A0A0B4J275 112 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 C1orf226A1L170 272 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 DYTNA2CJ06 578 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 GABRR3A8MPY1 467 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 PSMD12O00232 456 aaPredicted RBP7.59□□□□□ -1.19
MRPL55-211ENST00000366738 ERAL1O75616 437 aaKnown RBP7.59□□□□□ -1.19
MRPL55-211ENST00000366738 SLC22A3O75751 556 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 SEC24DO94855 1032 aaPredicted RBP7.59□□□□□ -1.19
MRPL55-211ENST00000366738 LAMP1P11279 417 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 AGAP20933 346 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 PRPS1L1P21108 318 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 GSTM5P46439 218 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 CASP6P55212 293 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 WNT3P56703 355 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 PHC1P78364 1004 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 RBPJQ06330 500 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 KLF10Q13118 480 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 RCAN2Q14206 197 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 HEPACAMQ14CZ8 416 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 RPS6KA2Q15349 733 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 LTB4RQ15722 352 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 FAM174BQ3ZCQ3 159 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 TIGD2Q4W5G0 525 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 AGKQ53H12 422 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 FCRLBQ6BAA4 426 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 OR4F3Q6IEY1 312 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 DGAT2L6Q6ZPD8 337 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 QSOX2Q6ZRP7 698 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 CAMKMTQ7Z624 323 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 ANKRD46Q86W74 232 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 CLECL1Q8IZS7 167 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 FITM2Q8N6M3 262 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 POU5F2Q8N7G0 328 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 ANKS4BQ8N8V4 417 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 ACBD4Q8NC06 268 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 SUN3Q8TAQ9 357 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 ADAMTS18Q8TE60 1221 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 DOK4Q8TEW6 326 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 VPS33AQ96AX1 596 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 TESCQ96BS2 214 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 PPCDCQ96CD2 204 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 HES7Q9BYE0 225 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 ENKD1Q9H0I2 346 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.59□□□□□ -1.19
MRPL55-211ENST00000366738 SLC52A3Q9NQ40 469 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 MIEF1Q9NQG6 463 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 PRTFDC1Q9NRG1 225 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 C14orf105Q9NVL8 296 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 MS4A12Q9NXJ0 267 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 SH3BP4Q9P0V3 963 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 ABI3Q9P2A4 366 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 SPACA6W5XKT8 324 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 SCN2AQ99250 2005 aa7.59□□□□□ -1.19
MRPL55-211ENST00000366738 FAM234BA2RU67 622 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 OR5H15A6NDH6 313 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 TMEM200CA6NKL6 621 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 CAPN14A8MX76 684 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 PDPK1O15530 556 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 ZNHIT1O43257 154 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 PRMT3O60678 531 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 CCDC22O60826 627 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 SCN2BO60939 215 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 GUCY1B2O75343 617 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 RASAL1O95294 804 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 TLX1P31314 330 aaPredicted RBP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 DNAJA1P31689 397 aaKnown RBP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 SOX18P35713 384 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 FEN1P39748 380 aaKnown RBP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 POLR2JP52435 117 aaKnown RBP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 CLNS1AP54105 237 aaKnown RBP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 IGLV3-21P80748 117 aaPredicted RBP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 ACTN3Q08043 901 aaPredicted RBP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 SLC13A2Q13183 592 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 CEBPEQ15744 281 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 PGS1Q32NB8 556 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 VPS26BQ4G0F5 336 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 CPTPQ5TA50 214 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 H3F3CQ6NXT2 135 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 SLC2A7Q6PXP3 512 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 ANKRD37Q7Z713 158 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 RETREG3Q86VR2 466 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 SNX32Q86XE0 403 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 TGIF2LYQ8IUE0 185 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 ZNF595Q8IYB9 648 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 COQ8BQ96D53 544 aa7.58□□□□□ -1.2
MRPL55-211ENST00000366738 ZNF764Q96H86 408 aaPredicted RBP7.58□□□□□ -1.2
MRPL55-211ENST00000366738 MAGED4Q96JG8 741 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms