RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 TBC1D29Q9UFV1 150 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 KCNN3Q9UGI6 736 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 IL17BQ9UHF5 180 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 MAD2L2Q9UI95 211 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 GGA2Q9UJY4 613 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 IKZF3Q9UKT9 509 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 ELF5Q9UKW6 265 aaPredicted RBP1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 PIN4Q9Y237 131 aaKnown RBP1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 NUDCQ9Y266 331 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 WDR83OSQ9Y284 106 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 ASB3Q9Y575 518 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 FAM169AQ9Y6X4 670 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 ARHGAP31Q2M1Z3 1444 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 KIF24Q5T7B8 1368 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 ABCC11Q96J66 1382 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 COL4A4P53420 1690 aaPredicted RBP1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 VIRMAQ69YN4 1812 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 A0A1W2PPW3 197 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 A0A1W2PQ72 361 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 LOC390937A0A1W2PQ73 354 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 SMCO2A6NFE2 343 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 EFCAB10A6NFE3 127 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 NEMP2A6NFY4 417 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 FAM47DPA6NHR8 397 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 ARGFXA6NJG6 315 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 TMEM114B3SHH9 223 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 E9PAM4 449 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PDHXO00330 501 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 NACADO15069 1562 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 VILLO15195 856 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 DENRO43583 198 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 TRAPPC3O43617 180 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 NUDT21O43809 227 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 GMFGO60234 142 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CACNG3O60359 315 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 DOK2O60496 412 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 ATP9AO75110 1047 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PSIP1O75475 530 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CRCPO75575 148 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PRDM1O75626 825 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CBR3O75828 277 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 IDH1O75874 414 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 RBBP9O75884 186 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 SOGA1O94964 1423 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 KRT75O95678 551 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 GNA14O95837 355 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 RENP00797 406 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CSF2P04141 144 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 FYNP06241 537 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 GLAP06280 429 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CAPN1P07384 714 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 FGF4P08620 206 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 HSMCR30P0CW71 290 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 TPBGLP0DKB5 382 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 SELEP16581 610 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 IFNAR1P17181 557 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 HOXB8P17481 243 aaPredicted RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CCNA2P20248 432 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 RAB4AP20338 218 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CD27P26842 260 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PPP2R1AP30153 589 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PKLRP30613 574 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 MAT2AP31153 395 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 IFNA8P32881 189 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 HOXD13P35453 343 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 SLC26A3P40879 764 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 OR1G1P47890 313 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 SUCLG1P53597 346 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 MAPK12P53778 367 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PRRX1P54821 245 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 MFAP3P55082 362 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CDH6P55285 790 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 EIF3EP60228 445 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PLOD1Q02809 727 aaPredicted RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CREB5Q02930 508 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 ZNF33BQ06732 778 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 ILF2Q12905 390 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 HSPB3Q12988 150 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 FADDQ13158 208 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CHIT1Q13231 466 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 SRSF9Q13242 221 aaKnown RBP eCLIP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 DDX39BQ13838 428 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CHRNA6Q15825 494 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 ZNF79Q15937 498 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 Q1RN00 199 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PARP6Q2NL67 630 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 SMU1Q2TAY7 513 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 KLHL40Q2TBA0 621 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 DNAL1Q4LDG9 190 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 HSP90AA4PQ58FG1 418 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CMPK2Q5EBM0 449 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 ANKRD20A3Q5VUR7 823 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 SLC25A24Q6NUK1 477 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 METAP1DQ6UB28 335 aaPredicted RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PET117Q6UWS5 81 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 IDO2Q6ZQW0 420 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 BZW1Q7L1Q6 419 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 PIWIL3Q7Z3Z3 882 aaKnown RBP1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 TPRA1Q86W33 373 aa1.7□□□□□ -2.14
RNU4-42P-201ENST00000364738 CROCCP3Q8IVE0 287 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms