RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ITCHQ96J02 903 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 VSTM2LQ96N03 204 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 MS4A4EQ96PG1 132 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 BTBD9Q96Q07 612 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 PANX1Q96RD7 426 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 CDCP1Q9H5V8 836 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 TRIM45Q9H8W5 580 aaPredicted RBP12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 SLC52A3Q9NQ40 469 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 CACNA1BQ00975 2339 aa12.82□□□□□ -0.36
NSMCE1-201ENST00000361439 FRG2CA6NGY1 282 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 RFXANKO14593 260 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 CDK9P50750 372 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 NRG3P56975 720 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 DUSP8Q13202 625 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 EXOSC7Q15024 291 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 TIGD2Q4W5G0 525 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 CDRT4Q8N9R6 151 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 NUP43Q8NFH3 380 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 C9orf43Q8TAL5 461 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 SLC22A8Q8TCC7 542 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 LCORQ96JN0 433 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 PHF12Q96QT6 1004 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 UBL7Q96S82 380 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 LMF2Q9BU23 707 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 NMUR2Q9GZQ4 415 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 CXorf36Q9H7Y0 433 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 SERHLQ9NQF3 203 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 VPS4AQ9UN37 437 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 GPR55Q9Y2T6 319 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 NDUFAF1Q9Y375 327 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 SNX8Q9Y5X2 465 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 CAPN7Q9Y6W3 813 aa12.81□□□□□ -0.36
NSMCE1-201ENST00000361439 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 BBIP1A8MTZ0 92 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 CAPN14A8MX76 684 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 TO15178 435 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 PRKNO60260 465 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 DPM1O60762 260 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 ERN1O75460 977 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 ITGA10O75578 1167 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 DCTN3O75935 186 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 OR2J2O76002 312 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 NPPAP01160 153 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 SNRPB2P08579 225 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 NAGAP17050 411 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 CASRP41180 1078 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 MAP3K8P41279 467 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 PRIM2P49643 509 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 TMED10P49755 219 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 SSR4P51571 173 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 KLF10Q13118 480 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 SPDYE7PQ495Y7 208 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 OPN5Q6U736 354 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 MTDHQ86UE4 582 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 ANKRD46Q86W74 232 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 CLECL1Q8IZS7 167 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 ZADH2Q8N4Q0 377 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 DPP10Q8N608 796 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 HORMAD2Q8N7B1 307 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 GTF2H4Q92759 462 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 VPS33AQ96AX1 596 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 GIMAP5Q96F15 307 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 SGCZQ96LD1 299 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 GAL3ST4Q96RP7 486 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 NPAS2Q99743 824 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 TRIM4Q9C037 500 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 MYLK2Q9H1R3 596 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 FOLH1BQ9HBA9 442 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 ZCCHC3Q9NUD5 404 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 LEF1Q9UJU2 399 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 PCDHGB3Q9Y5G1 929 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 GMEB1Q9Y692 573 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 DOCK10Q96BY6 2186 aa12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 KMT2BQ9UMN6 2715 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-201ENST00000361439 A0A096LPI6 279 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 DUXAA6NLW8 204 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 C9JVG2 144 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 NR5A2O00482 541 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 ANGPT2O15123 496 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 ABCB1P08183 1280 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 FAM87AP0C7U9 286 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 CT45A8P0DMV1 189 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 CT45A9P0DMV2 189 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 CAPN3P20807 821 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 EFNA1P20827 205 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 PTGER1P34995 402 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 CYB561P49447 251 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 HLCSP50747 726 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 SF3A3Q12874 501 aaKnown RBP eCLIP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 STX5Q13190 355 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 RAPSNQ13702 412 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 UBAP2LQ14157 1087 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 TLR1Q15399 786 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 CYP27C1Q4G0S4 372 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 LACTB2Q53H82 288 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 CT45A2Q5DJT8 189 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 EXOSC6Q5RKV6 272 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 LRIF1Q5T3J3 769 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 B3GNTL1Q67FW5 361 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 MFSD12Q6NUT3 480 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms