RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 CPZQ66K79 652 aa12.79□□□□□ -0.36
LDB3-202ENST00000361373 KCTD11Q693B1 232 aa12.79□□□□□ -0.36
LDB3-202ENST00000361373 ZNF100Q8IYN0 542 aa12.79□□□□□ -0.36
LDB3-202ENST00000361373 OR2L8Q8NGY9 312 aa12.79□□□□□ -0.36
LDB3-202ENST00000361373 MUS81Q96NY9 551 aa12.79□□□□□ -0.36
LDB3-202ENST00000361373 SLC7A11Q9UPY5 501 aa12.79□□□□□ -0.36
LDB3-202ENST00000361373 OR2T1O43869 369 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 CLPXO76031 633 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 ZNF888P0CJ79 500 aaPredicted RBP12.78□□□□□ -0.36
LDB3-202ENST00000361373 RPS26P62854 115 aaKnown RBP12.78□□□□□ -0.36
LDB3-202ENST00000361373 MLF2Q15773 248 aaPredicted RBP12.78□□□□□ -0.36
LDB3-202ENST00000361373 CNPY1Q3B7I2 92 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 PIGGQ5H8A4 983 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 TMEM240Q5SV17 173 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 UBE2Q1Q7Z7E8 422 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 SLC44A3Q8N4M1 653 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 ACBD7Q8N6N7 88 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 DPH2Q9BQC3 489 aaPredicted RBP12.78□□□□□ -0.36
LDB3-202ENST00000361373 ACSL6Q9UKU0 697 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 CIB4A0PJX0 185 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 SDC1P18827 310 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 FOXK1P85037 733 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 OCLNQ16625 522 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 DEFB110Q30KQ9 67 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 CWF19L1Q69YN2 538 aaKnown RBP12.78□□□□□ -0.36
LDB3-202ENST00000361373 RTN4RL1Q86UN2 441 aaPredicted RBP12.78□□□□□ -0.36
LDB3-202ENST00000361373 PINK1Q9BXM7 581 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 SACM1LQ9NTJ5 587 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 ST14Q9Y5Y6 855 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 FMO6PO60774 539 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 CERS1P27544 350 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 CDH15P55291 814 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 LAPTM4AQ15012 233 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 SGCAQ16586 387 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 SERPINA11Q86U17 422 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 OR4K5Q8NGD3 323 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 OR5K2Q8NHB8 316 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 UHRF1Q96T88 793 aaPredicted RBP12.78□□□□□ -0.36
LDB3-202ENST00000361373 KCNK12Q9HB15 430 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 SLC35A3Q9Y2D2 325 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 SCN7AQ01118 1682 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 PLD2O14939 933 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 CXCL10P02778 98 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 GRK5P34947 590 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 PRPS1P60891 318 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 DCAF7P61962 342 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 ZNF423Q2M1K9 1284 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 GGTA1PQ4G0N0 100 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 GPR137CQ8N3F9 429 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 CEP76Q8TAP6 659 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 SECISBP2Q96T21 854 aaKnown RBP12.78□□□□□ -0.36
LDB3-202ENST00000361373 MALT1Q9UDY8 824 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 TBX21Q9UL17 535 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 TJP1Q07157 1748 aa12.78□□□□□ -0.36
LDB3-202ENST00000361373 TCRBV5S1A1TA0A578 114 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 FOXE1O00358 373 aaPredicted RBP12.77□□□□□ -0.36
LDB3-202ENST00000361373 HK3P52790 923 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 SEMA3BQ13214 749 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 LRRN1Q6UXK5 716 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 TSPYL5Q86VY4 417 aaPredicted RBP12.77□□□□□ -0.36
LDB3-202ENST00000361373 ZNF761Q86XN6 746 aaPredicted RBP12.77□□□□□ -0.36
LDB3-202ENST00000361373 CREB3L4Q8TEY5 395 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 TESCQ96BS2 214 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 SLC7A6OSQ96CW6 309 aaPredicted RBP12.77□□□□□ -0.36
LDB3-202ENST00000361373 TCTN2Q96GX1 697 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 TAAR2Q9P1P5 351 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 SIT1Q9Y3P8 196 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 OR14I1A6ND48 311 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 FTCDNL1E5RQL4 147 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 KLKB1P03952 638 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 HIST1H1TP22492 207 aaPredicted RBP12.77□□□□□ -0.36
LDB3-202ENST00000361373 TUBB3Q13509 450 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 RPE65Q16518 533 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 TMEM52BQ4KMG9 183 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 MS4A15Q8N5U1 240 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 ELSPBP1Q96BH3 223 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 RTP3Q9BQQ7 232 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 RXFP3Q9NSD7 469 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 LRIT1Q9P2V4 623 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 PCDHA9Q9Y5H5 950 aa12.77□□□□□ -0.36
LDB3-202ENST00000361373 LRP5O75197 1615 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 C17orf105B2RV13 164 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 CHP2O43745 196 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 SLC19A2O60779 497 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 SNAP29O95721 258 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 CCNOP22674 350 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 ZNF782Q6ZMW2 699 aaPredicted RBP12.77□□□□□ -0.37
LDB3-202ENST00000361373 ZNF619Q8N2I2 560 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 TRUB1Q8WWH5 349 aaKnown RBP12.77□□□□□ -0.37
LDB3-202ENST00000361373 DPAGT1Q9H3H5 408 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 ACSS1Q9NUB1 689 aaPredicted RBP12.77□□□□□ -0.37
LDB3-202ENST00000361373 PFDN2Q9UHV9 154 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 STOML2Q9UJZ1 356 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.37
LDB3-202ENST00000361373 SLC9B1P1A6NJY1 282 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 MT-ND2P03891 347 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 BMP2P12643 396 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 CAPN3P20807 821 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 CBLP22681 906 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms