RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SFXN5Q8TD22 340 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 BIRC7Q96CA5 298 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 XPNPEP1Q9NQW7 623 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 BOKQ9UMX3 212 aaPredicted RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 ANKRD30BLA7E2S9 258 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ATE1O95260 518 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 IL7P13232 177 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 JUPP14923 745 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 TBPL1P62380 186 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 PTPRCAPQ14761 206 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ARHGAP19Q14CB8 494 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ABHD17BQ5VST6 288 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 SMIM15Q7Z3B0 74 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 OR4K3Q96R72 315 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 PITHD1Q9GZP4 211 aaPredicted RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 PELI2Q9HAT8 420 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 MGAT4CQ9UBM8 478 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 FAM230AA0A1W2PPH8 454 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 FAM205BPQ63HN1 556 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 SLC2A12Q8TD20 617 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 J3KR12 359 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 AHSGP02765 367 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ZNF181Q2M3W8 571 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 MAELQ96JY0 434 aaKnown RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 BCL7BQ9BQE9 202 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ZNF649Q9BS31 505 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 AP1M2Q9Y6Q5 423 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 SCAMP2O15127 329 aaKnown RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 SEMG2Q02383 582 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 NXPE4Q6UWF7 544 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 HACD2Q6Y1H2 254 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 PCDHAC1Q9H158 963 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 KCNK13Q9HB14 408 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 PLAGL1Q9UM63 463 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 MRPS14O60783 128 aaKnown RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 MTX2O75431 263 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 C1GALT1C1LP0DN25 315 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 GCH1P30793 250 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 TRIM46Q7Z4K8 759 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 SLC25A44Q96H78 314 aaPredicted RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 CUEDC1Q9NWM3 386 aaPredicted RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 DNAJC27Q9NZQ0 273 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 C10orf71Q711Q0 1435 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 RASAL1O95294 804 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ZNF678Q5SXM1 525 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ATAD3CQ5T2N8 411 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 TCEANCQ8N8B7 351 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ZNF610Q8N9Z0 462 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 HSPBAP1Q96EW2 488 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 AKAP12Q02952 1782 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 DOCK11Q5JSL3 2073 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 TRAPPC13A5PLN9 417 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 PCP4L1A6NKN8 68 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 PIP5K1CO60331 668 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 C8orf89P0DMQ9 161 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ZNF182P17025 639 aaPredicted RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 CYCSP99999 105 aaKnown RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 RELL1Q8IUW5 271 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ATG5Q9H1Y0 275 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 SCN9AQ15858 1988 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 LSSP48449 732 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 ODF4Q2M2E3 257 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 WDR53Q7Z5U6 358 aaPredicted RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 TSPAN33Q86UF1 283 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 UBQLNLQ8IYU4 475 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 UBQLN2Q9UHD9 624 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 FBXO7Q9Y3I1 522 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 XRN1Q8IZH2 1706 aaKnown RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 LOC102725191A0A1B0GVB3 256 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 CREBL2O60519 120 aaPredicted RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 CNTN5O94779 1100 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 SLC11A1P49279 550 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 SCAPQ12770 1279 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 TXNDC5Q8NBS9 432 aaKnown RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 FRS2Q8WU20 508 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 PENKP01210 267 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 SERPINE2P07093 398 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 PNMTP11086 282 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 FOLR3P41439 243 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 TMEM53Q6P2H8 277 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 NUP43Q8NFH3 380 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 PLEKHJ1Q9NW61 149 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 XRCC1P18887 633 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 APLNRP35414 380 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 LUMP51884 338 aaPredicted RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 GLO1Q04760 184 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 HNRNPA0Q13151 305 aaKnown RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 PKDCCQ504Y2 493 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 CEACAM19Q7Z692 300 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 A8MXE2 369 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 CKMT2P17540 419 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 CTHP32929 405 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 ARG2P78540 354 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 HHEXQ03014 270 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 NIPAL4Q0D2K0 466 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 EIF5A2Q9GZV4 153 aaKnown RBP9.23□□□□□ -0.93
CUX1-203ENST00000360264 UBR2Q8IWV8 1755 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 A0A0U1RQJ8 604 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 A0A1W2PPW3 197 aa9.23□□□□□ -0.93
CUX1-203ENST00000360264 CPT2P23786 658 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms